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  5. Zm00001e009653_P001

Zm00001e009653_P001


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009653_P001
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
AT1G69580 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT2G02060 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT4G04605 No alias No description available 0.02 Archaeplastida
AT4G13640 UNE16 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
GSVIVT01007065001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01015900001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
Gb_09291 No alias Protein PHR1-LIKE 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g14490.1 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
LOC_Os05g41240.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os08g25799.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g25820.2 No alias G2-like GARP transcription factor 0.04 Archaeplastida
MA_28188g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Mp3g04970.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Mp4g01560.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c18_20920V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c20_7050V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c3_10940V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c3_30710V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Solyc10g076460.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
MF GO:0003993 acid phosphatase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016791 phosphatase activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0031023 microtubule organizing center organization IEP Neighborhood
MF GO:0042393 histone binding IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 40 90
IPR025756 Myb_CC_LHEQLE 132 178
No external refs found!