Description : C2H2 zinc finger transcription factor
Gene families : OG0000935 (Archaeplastida) Phylogenetic Tree(s): OG0000935_tree ,
OG_05_0000679 (LandPlants) Phylogenetic Tree(s): OG_05_0000679_tree ,
OG_06_0060433 (SeedPlants) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Zm00001e009663_P001 | |
Cluster | HCCA: Cluster_68 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00022p00243980 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.09 | Archaeplastida | |
AMTR_s00093p00164790 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | Archaeplastida | |
AMTR_s00114p00100630 | evm_27.TU.AmTr_v1... | Zinc finger protein WIP3 OS=Arabidopsis thaliana | 0.07 | Archaeplastida | |
AT1G13290 | WIP6, DOT5 | C2H2-like zinc finger protein | 0.12 | Archaeplastida | |
AT1G51220 | WIP5 | WIP domain protein 5 | 0.03 | Archaeplastida | |
AT3G20880 | WIP4 | WIP domain protein 4 | 0.03 | Archaeplastida | |
GSVIVT01009046001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | Archaeplastida | |
GSVIVT01011943001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.09 | Archaeplastida | |
GSVIVT01025301001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | Archaeplastida | |
GSVIVT01032076001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.19 | Archaeplastida | |
GSVIVT01033329001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.05 | Archaeplastida | |
LOC_Os08g39390.1 | No alias | C2H2 zinc finger transcription factor | 0.02 | Archaeplastida | |
LOC_Os09g13680.1 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
LOC_Os09g31140.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
MA_3555g0010 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
MA_97533g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
Mp1g09500.1 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
Pp3c15_17790V3.1 | No alias | C2H2-type zinc finger family protein | 0.04 | Archaeplastida | |
Pp3c9_22230V3.1 | No alias | C2H2-type zinc finger family protein | 0.04 | Archaeplastida | |
Solyc04g074320.3.1 | No alias | no hits & (original description: none) | 0.05 | Archaeplastida | |
Solyc05g009770.3.1 | No alias | C2H2 zinc finger transcription factor | 0.06 | Archaeplastida | |
Solyc06g074360.4.1 | No alias | C2H2 zinc finger transcription factor | 0.04 | Archaeplastida | |
Zm00001e003504_P001 | No alias | C2H2 zinc finger transcription factor | 0.07 | Archaeplastida | |
Zm00001e019211_P001 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida | |
Zm00001e024373_P001 | No alias | C2H2 zinc finger transcription factor | 0.13 | Archaeplastida | |
Zm00001e026959_P001 | No alias | C2H2 zinc finger transcription factor | 0.08 | Archaeplastida | |
Zm00001e031762_P001 | No alias | C2H2 zinc finger transcription factor | 0.05 | Archaeplastida | |
Zm00001e034518_P001 | No alias | C2H2 zinc finger transcription factor | 0.03 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003674 | molecular_function | IEP | Neighborhood |
MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
MF | GO:0003677 | DNA binding | IEP | Neighborhood |
MF | GO:0005488 | binding | IEP | Neighborhood |
MF | GO:0005524 | ATP binding | IEP | Neighborhood |
CC | GO:0005575 | cellular_component | IEP | Neighborhood |
CC | GO:0005634 | nucleus | IEP | Neighborhood |
BP | GO:0006355 | regulation of transcription, DNA-templated | IEP | Neighborhood |
BP | GO:0007275 | multicellular organism development | IEP | Neighborhood |
MF | GO:0008144 | drug binding | IEP | Neighborhood |
BP | GO:0008150 | biological_process | IEP | Neighborhood |
BP | GO:0009889 | regulation of biosynthetic process | IEP | Neighborhood |
BP | GO:0010468 | regulation of gene expression | IEP | Neighborhood |
BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | Neighborhood |
BP | GO:0019222 | regulation of metabolic process | IEP | Neighborhood |
BP | GO:0031323 | regulation of cellular metabolic process | IEP | Neighborhood |
BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | Neighborhood |
BP | GO:0032501 | multicellular organismal process | IEP | Neighborhood |
BP | GO:0032502 | developmental process | IEP | Neighborhood |
MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
CC | GO:0033643 | host cell part | IEP | Neighborhood |
CC | GO:0033646 | host intracellular part | IEP | Neighborhood |
CC | GO:0033647 | host intracellular organelle | IEP | Neighborhood |
CC | GO:0033648 | host intracellular membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0042025 | host cell nucleus | IEP | Neighborhood |
CC | GO:0043226 | organelle | IEP | Neighborhood |
CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
MF | GO:0043565 | sequence-specific DNA binding | IEP | Neighborhood |
CC | GO:0044217 | other organism part | IEP | Neighborhood |
CC | GO:0044424 | intracellular part | IEP | Neighborhood |
CC | GO:0044464 | cell part | IEP | Neighborhood |
BP | GO:0048856 | anatomical structure development | IEP | Neighborhood |
BP | GO:0050789 | regulation of biological process | IEP | Neighborhood |
BP | GO:0050794 | regulation of cellular process | IEP | Neighborhood |
BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | Neighborhood |
BP | GO:0051252 | regulation of RNA metabolic process | IEP | Neighborhood |
BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | Neighborhood |
BP | GO:0065007 | biological regulation | IEP | Neighborhood |
BP | GO:0080090 | regulation of primary metabolic process | IEP | Neighborhood |
MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | Neighborhood |
BP | GO:2000112 | regulation of cellular macromolecule biosynthetic process | IEP | Neighborhood |
BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | Neighborhood |
No InterPro domains available for this sequence
No external refs found! |