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  5. Zm00001e009663_P001

Zm00001e009663_P001


Description : C2H2 zinc finger transcription factor


Gene families : OG0000935 (Archaeplastida) Phylogenetic Tree(s): OG0000935_tree ,
OG_05_0000679 (LandPlants) Phylogenetic Tree(s): OG_05_0000679_tree ,
OG_06_0060433 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009663_P001
Cluster HCCA: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00243980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.09 Archaeplastida
AMTR_s00093p00164790 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
AMTR_s00114p00100630 evm_27.TU.AmTr_v1... Zinc finger protein WIP3 OS=Arabidopsis thaliana 0.07 Archaeplastida
AT1G13290 WIP6, DOT5 C2H2-like zinc finger protein 0.12 Archaeplastida
AT1G51220 WIP5 WIP domain protein 5 0.03 Archaeplastida
AT3G20880 WIP4 WIP domain protein 4 0.03 Archaeplastida
GSVIVT01009046001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 Archaeplastida
GSVIVT01011943001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.09 Archaeplastida
GSVIVT01025301001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.02 Archaeplastida
GSVIVT01032076001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.19 Archaeplastida
GSVIVT01033329001 No alias RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.05 Archaeplastida
LOC_Os08g39390.1 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
LOC_Os09g13680.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
LOC_Os09g31140.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
MA_3555g0010 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
MA_97533g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g09500.1 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Pp3c15_17790V3.1 No alias C2H2-type zinc finger family protein 0.04 Archaeplastida
Pp3c9_22230V3.1 No alias C2H2-type zinc finger family protein 0.04 Archaeplastida
Solyc04g074320.3.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc05g009770.3.1 No alias C2H2 zinc finger transcription factor 0.06 Archaeplastida
Solyc06g074360.4.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
Zm00001e003504_P001 No alias C2H2 zinc finger transcription factor 0.07 Archaeplastida
Zm00001e019211_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e024373_P001 No alias C2H2 zinc finger transcription factor 0.13 Archaeplastida
Zm00001e026959_P001 No alias C2H2 zinc finger transcription factor 0.08 Archaeplastida
Zm00001e031762_P001 No alias C2H2 zinc finger transcription factor 0.05 Archaeplastida
Zm00001e034518_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!