Zm00001e009700_P001


Description : A-class RAB GTPase


Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0000161 (LandPlants) Phylogenetic Tree(s): OG_05_0000161_tree ,
OG_06_0000127 (SeedPlants) Phylogenetic Tree(s): OG_06_0000127_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e009700_P001
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AT1G01200 RABA3, ATRAB-A3, ATRABA3 RAB GTPase homolog A3 0.03 Archaeplastida
AT1G28550 RABA1i, AtRABA1i RAB GTPase homolog A1I 0.02 Archaeplastida
AT3G12160 RABA4D, ATRABA4D RAB GTPase homolog A4D 0.05 Archaeplastida
AT5G47960 ATRABA4C, RABA4C, SMG1 RAB GTPase homolog A4C 0.03 Archaeplastida
Cre03.g189250 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
GSVIVT01023225001 No alias Vesicle trafficking.regulation of membrane tethering and... 0.03 Archaeplastida
LOC_Os01g62950.1 No alias A-class RAB GTPase 0.02 Archaeplastida
LOC_Os05g01480.1 No alias A-class RAB GTPase 0.03 Archaeplastida
LOC_Os05g20050.1 No alias A-class RAB GTPase 0.02 Archaeplastida
LOC_Os05g48980.1 No alias A-class RAB GTPase 0.03 Archaeplastida
LOC_Os09g15790.1 No alias A-class RAB GTPase 0.03 Archaeplastida
MA_129080g0010 No alias A-class RAB GTPase 0.03 Archaeplastida
MA_15386g0010 No alias A-class RAB GTPase 0.04 Archaeplastida
Mp3g12050.1 No alias A-class RAB GTPase 0.02 Archaeplastida
Smo148444 No alias Vesicle trafficking.regulation of membrane tethering and... 0.02 Archaeplastida
Solyc01g103380.4.1 No alias A-class RAB GTPase 0.04 Archaeplastida
Solyc03g064020.3.1 No alias A-class RAB GTPase 0.04 Archaeplastida
Solyc03g118820.4.1 No alias A-class RAB GTPase 0.05 Archaeplastida
Zm00001e026848_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004512 inositol-3-phosphate synthase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006020 inositol metabolic process IEP Neighborhood
BP GO:0006021 inositol biosynthetic process IEP Neighborhood
BP GO:0006066 alcohol metabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
BP GO:0019751 polyol metabolic process IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0046165 alcohol biosynthetic process IEP Neighborhood
BP GO:0046173 polyol biosynthetic process IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
BP GO:1901615 organic hydroxy compound metabolic process IEP Neighborhood
BP GO:1901617 organic hydroxy compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001806 Small_GTPase 14 174
No external refs found!