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  5. Zm00001e010124_P002

Zm00001e010124_P002


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010124_P002

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00150040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00019p00235390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.01 Archaeplastida
AMTR_s00022p00198330 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.01 Archaeplastida
AMTR_s00047p00197010 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
AMTR_s00106p00142470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.01 Archaeplastida
AMTR_s00106p00142740 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AT1G27370 SPL10 squamosa promoter binding protein-like 10 0.02 Archaeplastida
AT2G42200 AtSPL9, SPL9 squamosa promoter binding protein-like 9 0.03 Archaeplastida
GSVIVT01008556001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01010496001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
GSVIVT01014302001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.06 Archaeplastida
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.07 Archaeplastida
GSVIVT01018205001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.06 Archaeplastida
GSVIVT01033519001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.02 Archaeplastida
Gb_15605 No alias transcription factor (SBP) 0.04 Archaeplastida
Gb_22010 No alias transcription factor (SBP) 0.01 Archaeplastida
LOC_Os02g08070.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os04g46580.1 No alias transcription factor (SBP) 0.01 Archaeplastida
LOC_Os07g32170.1 No alias transcription factor (SBP) 0.02 Archaeplastida
LOC_Os09g32944.1 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_10435426g0010 No alias transcription factor (SBP) 0.04 Archaeplastida
Solyc05g015840.3.1 No alias transcription factor (SBP) 0.02 Archaeplastida
Solyc12g038520.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e010443_P001 No alias transcription factor (SBP) 0.01 Archaeplastida
Zm00001e018817_P003 No alias transcription factor (SBP) 0.05 Archaeplastida
Zm00001e025234_P001 No alias transcription factor (SBP) 0.01 Archaeplastida
Zm00001e034628_P001 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e041526_P001 No alias transcription factor (SBP) 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004333 SBP_dom 109 182
No external refs found!