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  5. Zm00001e010182_P001

Zm00001e010182_P001


Description : Pentatricopeptide repeat-containing protein At2g36980, mitochondrial OS=Arabidopsis thaliana (sp|q9sjk9|pp189_arath : 461.0)


Gene families : OG0009780 (Archaeplastida) Phylogenetic Tree(s): OG0009780_tree ,
OG_05_0011972 (LandPlants) Phylogenetic Tree(s): OG_05_0011972_tree ,
OG_06_0012004 (SeedPlants) Phylogenetic Tree(s): OG_06_0012004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010182_P001
Cluster HCCA: Cluster_358

Target Alias Description ECC score Gene Family Method Actions
AT1G09190 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
Solyc03g006990.1.1 No alias Pentatricopeptide repeat-containing protein At5g66520... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 302 350
IPR002885 Pentatricopeptide_repeat 403 450
IPR002885 Pentatricopeptide_repeat 170 216
IPR002885 Pentatricopeptide_repeat 44 68
IPR002885 Pentatricopeptide_repeat 113 139
IPR002885 Pentatricopeptide_repeat 273 298
IPR002885 Pentatricopeptide_repeat 245 269
IPR002885 Pentatricopeptide_repeat 480 500
IPR002885 Pentatricopeptide_repeat 378 402
No external refs found!