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  5. Zm00001e010388_P001

Zm00001e010388_P001


Description : alpha-class expansin


Gene families : OG0000024 (Archaeplastida) Phylogenetic Tree(s): OG0000024_tree ,
OG_05_0029824 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0028346 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010388_P001
Cluster HCCA: Cluster_31

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00077570 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.expansins.alpha-type expansin 0.05 Archaeplastida
AT1G12560 ATEXP7, EXPA7,... expansin A7 0.03 Archaeplastida
AT5G39310 EXPA24, ATEXP24,... expansin A24 0.02 Archaeplastida
AT5G56320 ATEXP14, EXPA14,... expansin A14 0.02 Archaeplastida
GSVIVT01011437001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.04 Archaeplastida
GSVIVT01033691001 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.06 Archaeplastida
Gb_01958 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os04g15840.1 No alias alpha-class expansin 0.03 Archaeplastida
LOC_Os06g41700.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os08g44790.1 No alias alpha-class expansin 0.05 Archaeplastida
LOC_Os10g30340.1 No alias alpha-class expansin 0.02 Archaeplastida
LOC_Os12g36040.1 No alias alpha-class expansin 0.07 Archaeplastida
MA_172610g0010 No alias alpha-class expansin 0.02 Archaeplastida
Mp1g22740.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g01930.1 No alias alpha-class expansin 0.02 Archaeplastida
Mp5g20430.1 No alias alpha-class expansin 0.02 Archaeplastida
Pp3c18_19690V3.1 No alias expansin A16 0.02 Archaeplastida
Pp3c18_19720V3.1 No alias expansin A1 0.02 Archaeplastida
Smo179212 No alias Cell wall.cell wall proteins.expansins.alpha-type expansin 0.02 Archaeplastida
Solyc02g081210.3.1 No alias alpha-class expansin 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0004857 enzyme inhibitor activity IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
InterPro domains Description Start Stop
IPR009009 RlpA-like_DPBB 86 155
IPR007117 Expansin_CBD 166 244
No external refs found!