Zm00001e010393_P001


Description : no hits & (original description: none)


Gene families : OG0001030 (Archaeplastida) Phylogenetic Tree(s): OG0001030_tree ,
OG_05_0000707 (LandPlants) Phylogenetic Tree(s): OG_05_0000707_tree ,
OG_06_0000483 (SeedPlants) Phylogenetic Tree(s): OG_06_0000483_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010393_P001
Cluster HCCA: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
ATCG00490 RBCL ribulose-bisphosphate carboxylases 0.05 Archaeplastida
Gb_07644 No alias Ribulose bisphosphate carboxylase large chain... 0.02 Archaeplastida
Gb_15502 No alias Ribulose bisphosphate carboxylase large chain... 0.02 Archaeplastida
Gb_37464 No alias Ribulose bisphosphate carboxylase large chain... 0.02 Archaeplastida
LOC_Os01g58020.1 No alias Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.05 Archaeplastida
LOC_Os10g21268.1 No alias large subunit of ribulose-1,5-bisphosphat... 0.04 Archaeplastida
LOC_Os11g32770.1 No alias Ribulose bisphosphate carboxylase large chain OS=Oryza... 0.05 Archaeplastida
LOC_Os12g10580.1 No alias component psRPS15 of small ribosomal subunit proteome 0.04 Archaeplastida
Smo137874 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.07 Archaeplastida
Solyc00g500063.1.1 No alias large subunit of ribulose-1,5-bisphosphat... 0.09 Archaeplastida
Solyc07g021200.1.1 No alias Ribulose bisphosphate carboxylase large chain (Fragment)... 0.08 Archaeplastida
Solyc12g062560.1.1 No alias DNA-directed RNA polymerase subunit beta OS=Nicotiana... 0.04 Archaeplastida
Zm00001e002755_P001 No alias Ribulose bisphosphate carboxylase large chain OS=Zea... 0.1 Archaeplastida
Zm00001e042121_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e042351_P001 No alias no hits & (original description: none) 0.17 Archaeplastida
Zm00001e042372_P001 No alias Ribulose bisphosphate carboxylase large chain OS=Sorghum... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009539 photosystem II reaction center IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
MF GO:0016830 carbon-carbon lyase activity IEP Neighborhood
MF GO:0016831 carboxy-lyase activity IEP Neighborhood
MF GO:0016984 ribulose-bisphosphate carboxylase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0034645 cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043603 cellular amide metabolic process IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044249 cellular biosynthetic process IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:1901566 organonitrogen compound biosynthetic process IEP Neighborhood
BP GO:1901576 organic substance biosynthetic process IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!