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  5. Zm00001e010637_P001

Zm00001e010637_P001


Description : transcription factor (HD-ZIP I/II)


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0003020 (SeedPlants) Phylogenetic Tree(s): OG_06_0003020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010637_P001

Target Alias Description ECC score Gene Family Method Actions
LOC_Os02g43330.1 No alias transcription factor (HD-ZIP I/II) 0.01 Archaeplastida
LOC_Os03g07450.1 No alias transcription factor (HD-ZIP I/II) 0.01 Archaeplastida
LOC_Os03g08960.1 No alias transcription factor (HD-ZIP I/II) 0.01 Archaeplastida
LOC_Os04g45810.1 No alias transcription factor (HD-ZIP I/II) 0.01 Archaeplastida
Smo18217 No alias RNA biosynthesis.transcriptional activation.HB... 0.05 Archaeplastida
Solyc05g006980.3.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc10g150101.1.1 No alias transcription factor (HD-ZIP I/II) 0.04 Archaeplastida
Zm00001e022379_P002 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 56 109
No external refs found!