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  5. Zm00001e010648_P001

Zm00001e010648_P001


Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 208.0)


Gene families : OG0000233 (Archaeplastida) Phylogenetic Tree(s): OG0000233_tree ,
OG_05_0000415 (LandPlants) Phylogenetic Tree(s): OG_05_0000415_tree ,
OG_06_0000490 (SeedPlants) Phylogenetic Tree(s): OG_06_0000490_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010648_P001
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00174110 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01009297001 No alias RNA-binding protein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01030040001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
LOC_Os06g37000.2 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os07g39560.3 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os11g41890.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 Archaeplastida
MA_6673211g0010 No alias No annotation 0.02 Archaeplastida
Solyc07g048030.4.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.06 Archaeplastida
Solyc10g006050.3.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.05 Archaeplastida
Solyc11g012470.2.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc12g006180.2.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 Archaeplastida
Solyc12g014600.2.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0046912 transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer IEP Neighborhood
MF GO:0051536 iron-sulfur cluster binding IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
MF GO:0051540 metal cluster binding IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 107 173
IPR000504 RRM_dom 8 63
No external refs found!