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  5. Zm00001e010787_P001

Zm00001e010787_P001


Description : RING-H2 finger protein ATL3 OS=Arabidopsis thaliana (sp|q9xf63|atl3_arath : 90.5)


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000003 (LandPlants) Phylogenetic Tree(s): OG_05_0000003_tree ,
OG_06_0014032 (SeedPlants) Phylogenetic Tree(s): OG_06_0014032_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e010787_P001
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00200880 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00056p00122930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G22500 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G49200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G76410 ATL8 RING/U-box superfamily protein 0.08 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.04 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.02 Archaeplastida
AT2G27940 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT2G44578 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G18773 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G60220 ATL4, TL4 TOXICOS EN LEVADURA 4 0.04 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT3G61550 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G17245 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT4G35480 RHA3B RING-H2 finger A3B 0.05 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G27420 ATL31, CNI1 carbon/nitrogen insensitive 1 0.02 Archaeplastida
AT5G66070 No alias RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01029277001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Gb_14762 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14775 No alias RING-H2 finger protein ATL78 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Gb_15836 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_30879 No alias Probable E3 ubiquitin-protein ligase XERICO... 0.02 Archaeplastida
Gb_41046 No alias Putative RING-H2 finger protein ATL12 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g15100.1 No alias RING-H2 finger protein ATL40 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g15110.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g35347.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g35365.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g36300.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os02g37450.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os05g39260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g40020.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g34880.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g45580.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g34180.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.04 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g44950.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os09g38110.1 No alias RING-H2 finger protein ATL80 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g39770.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g39936.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g02220.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_101154g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10431161g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10435495g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10436650g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_17390g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_201864g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_214717g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_377006g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_3929631g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_5319g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_6931619g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_8338g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_83882g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_9591879g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c17_13190V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo172324 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo412609 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo441685 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc02g068415.1.1 No alias RING-H2 finger protein ATL73 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc03g114090.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc06g053640.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc11g005310.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc12g055710.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003426_P001 No alias ubiquitin protein ligase (XERICO) 0.05 Archaeplastida
Zm00001e007129_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e013412_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e013809_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e014764_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e015905_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e021729_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e036691_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 102 145
No external refs found!