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  5. Zm00001e011018_P001

Zm00001e011018_P001


Description : regulatory component RPT2 of 26S proteasome


Gene families : OG0003745 (Archaeplastida) Phylogenetic Tree(s): OG0003745_tree ,
OG_05_0004265 (LandPlants) Phylogenetic Tree(s): OG_05_0004265_tree ,
OG_06_0005211 (SeedPlants) Phylogenetic Tree(s): OG_06_0005211_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011018_P001
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AT4G29040 RPT2a regulatory particle AAA-ATPase 2A 0.05 Archaeplastida
Cpa|evm.model.tig00001042.6 No alias Protein degradation.26S proteasome.regulatory... 0.05 Archaeplastida
Cre07.g329700 No alias Protein degradation.26S proteasome.regulatory... 0.07 Archaeplastida
GSVIVT01028520001 No alias Protein degradation.26S proteasome.regulatory... 0.06 Archaeplastida
LOC_Os03g18690.1 No alias regulatory component RPT2 of 26S proteasome 0.02 Archaeplastida
LOC_Os07g49150.1 No alias regulatory component RPT2 of 26S proteasome 0.05 Archaeplastida
MA_10381416g0010 No alias 26S proteasome regulatory subunit 4 homolog B... 0.05 Archaeplastida
MA_10431395g0010 No alias regulatory component RPT2 of 26S proteasome 0.03 Archaeplastida
Mp6g16470.1 No alias regulatory component RPT2 of 26S proteasome 0.03 Archaeplastida
Pp3c16_23220V3.1 No alias AAA-type ATPase family protein 0.02 Archaeplastida
Pp3c22_7710V3.1 No alias AAA-type ATPase family protein 0.03 Archaeplastida
Smo267030 No alias Protein degradation.26S proteasome.regulatory... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
BP GO:0006606 protein import into nucleus IEP Neighborhood
BP GO:0006694 steroid biosynthetic process IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
BP GO:0007264 small GTPase mediated signal transduction IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
BP GO:0008202 steroid metabolic process IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
MF GO:0016229 steroid dehydrogenase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0017038 protein import IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Neighborhood
BP GO:0034504 protein localization to nucleus IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
CC GO:0035658 Mon1-Ccz1 complex IEP Neighborhood
CC GO:0042765 GPI-anchor transamidase complex IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0048583 regulation of response to stimulus IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0051170 import into nucleus IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
MF GO:0061608 nuclear import signal receptor activity IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
MF GO:0140104 molecular carrier activity IEP Neighborhood
MF GO:0140142 nucleocytoplasmic carrier activity IEP Neighborhood
InterPro domains Description Start Stop
IPR032501 Prot_ATP_ID_OB 116 170
IPR003959 ATPase_AAA_core 229 362
No external refs found!