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AT3G16580


Description : F-box and associated interaction domains-containing protein


Gene families : OG0005759 (Archaeplastida) Phylogenetic Tree(s): OG0005759_tree ,
OG_05_0003903 (LandPlants) Phylogenetic Tree(s): OG_05_0003903_tree ,
OG_06_0002488 (SeedPlants) Phylogenetic Tree(s): OG_06_0002488_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G16580
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G12170 No alias F-box family protein 0.08 Archaeplastida
AT1G12190 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT1G32430 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G51290 No alias F-box and associated interaction domains-containing protein 0.08 Archaeplastida
AT1G51320 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT1G58090 No alias F-box and associated interaction domains-containing protein 0.13 Archaeplastida
AT1G59630 No alias F-box associated ubiquitination effector family protein 0.1 Archaeplastida
AT1G77650 No alias F-box associated ubiquitination effector family protein 0.05 Archaeplastida
AT2G17310 SON1 F-box and associated interaction domains-containing protein 0.1 Archaeplastida
AT3G16590 No alias F-box and associated interaction domains-containing protein 0.07 Archaeplastida
AT3G18340 No alias F-box and associated interaction domains-containing protein 0.09 Archaeplastida
AT3G21410 No alias F-box and associated interaction domains-containing protein 0.06 Archaeplastida
AT3G51171 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G59590 No alias jacalin lectin family protein 0.08 Archaeplastida
AT3G59610 No alias F-box family protein / jacalin lectin family protein 0.09 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005773 vacuole IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005351 carbohydrate:proton symporter activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0005402 carbohydrate:cation symporter activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005887 integral component of plasma membrane IEP Neighborhood
BP GO:0009555 pollen development IEP Neighborhood
BP GO:0010208 pollen wall assembly IEP Neighborhood
BP GO:0010584 pollen exine formation IEP Neighborhood
BP GO:0010927 cellular component assembly involved in morphogenesis IEP Neighborhood
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015114 phosphate ion transmembrane transporter activity IEP Neighborhood
MF GO:0015144 carbohydrate transmembrane transporter activity IEP Neighborhood
MF GO:0015145 monosaccharide transmembrane transporter activity IEP Neighborhood
BP GO:0015749 monosaccharide transmembrane transport IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0034219 carbohydrate transmembrane transport IEP Neighborhood
BP GO:0048444 floral organ morphogenesis IEP Neighborhood
MF GO:0051119 sugar transmembrane transporter activity IEP Neighborhood
BP GO:0090697 post-embryonic plant organ morphogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 13 49
IPR006527 F-box-assoc_dom_typ1 200 365
No external refs found!