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  5. Zm00001e011069_P001

Zm00001e011069_P001


Description : pectin methylesterase


Gene families : OG0000046 (Archaeplastida) Phylogenetic Tree(s): OG0000046_tree ,
OG_05_0000020 (LandPlants) Phylogenetic Tree(s): OG_05_0000020_tree ,
OG_06_0000014 (SeedPlants) Phylogenetic Tree(s): OG_06_0000014_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011069_P001
Cluster HCCA: Cluster_315

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00230630 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00021p00242180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AMTR_s00038p00046180 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00040p00188020 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00040p00233690 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00129p00028250 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
AMTR_s00129p00044320 evm_27.TU.AmTr_v1... Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
AT2G26450 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT2G43050 ATPMEPCRD Plant invertase/pectin methylesterase inhibitor superfamily 0.08 Archaeplastida
AT2G45220 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT3G43270 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT3G47400 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT3G59010 PME61 pectin methylesterase 61 0.05 Archaeplastida
AT3G60730 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
AT4G00190 PME38, ATPME38 pectin methylesterase 38 0.07 Archaeplastida
AT4G02300 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
AT4G33220 PME44, ATPME44 pectin methylesterase 44 0.03 Archaeplastida
AT5G27870 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.05 Archaeplastida
AT5G51490 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
AT5G53370 ATPMEPCRF, PMEPCRF pectin methylesterase PCR fragment F 0.03 Archaeplastida
GSVIVT01012639001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.06 Archaeplastida
GSVIVT01016667001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.04 Archaeplastida
GSVIVT01018622001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
GSVIVT01023135001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.03 Archaeplastida
GSVIVT01026518001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.05 Archaeplastida
GSVIVT01027653001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.12 Archaeplastida
GSVIVT01028040001 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Gb_03174 No alias pectin methylesterase 0.03 Archaeplastida
Gb_05254 No alias pectin methylesterase 0.04 Archaeplastida
Gb_06356 No alias pectin methylesterase 0.04 Archaeplastida
Gb_10523 No alias pectin methylesterase 0.03 Archaeplastida
Gb_21388 No alias pectin methylesterase 0.06 Archaeplastida
Gb_24214 No alias pectin methylesterase 0.03 Archaeplastida
Gb_25439 No alias pectin methylesterase 0.03 Archaeplastida
Gb_28387 No alias pectin methylesterase 0.02 Archaeplastida
Gb_35881 No alias pectin methylesterase 0.03 Archaeplastida
Gb_36005 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os01g20980.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os01g57854.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os02g54190.1 No alias pectin methylesterase 0.03 Archaeplastida
LOC_Os05g29790.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os08g12410.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os08g34910.1 No alias pectin methylesterase 0.02 Archaeplastida
LOC_Os11g07090.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os11g08750.1 No alias pectin methylesterase 0.04 Archaeplastida
LOC_Os11g36240.1 No alias pectin methylesterase 0.03 Archaeplastida
MA_10332149g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10377619g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10434127g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_10434624g0020 No alias pectin methylesterase 0.03 Archaeplastida
MA_10435891g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_10436266g0010 No alias Pectinesterase 3 OS=Citrus sinensis... 0.02 Archaeplastida
MA_18093g0010 No alias Pectinesterase 2.1 OS=Solanum lycopersicum... 0.03 Archaeplastida
MA_5681731g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_648837g0010 No alias pectin methylesterase 0.03 Archaeplastida
MA_931259g0010 No alias pectin methylesterase 0.02 Archaeplastida
MA_96515g0010 No alias pectin methylesterase 0.03 Archaeplastida
Mp8g00060.1 No alias pectin methylesterase 0.01 Archaeplastida
Mp8g09330.1 No alias pectin methylesterase 0.03 Archaeplastida
Pp3c15_12280V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.04 Archaeplastida
Pp3c18_170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Archaeplastida
Pp3c21_11740V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Archaeplastida
Pp3c21_22110V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Archaeplastida
Pp3c26_2170V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.01 Archaeplastida
Pp3c2_35260V3.1 No alias pectin methylesterase 3 0.03 Archaeplastida
Pp3c8_3840V3.1 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Archaeplastida
Smo266995 No alias Cell wall.pectin.homogalacturonan.modification and... 0.07 Archaeplastida
Smo83744 No alias Cell wall.pectin.homogalacturonan.modification and... 0.02 Archaeplastida
Solyc01g091050.4.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc01g099950.1.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc01g099960.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc02g080200.4.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc02g080220.3.1 No alias pectin methylesterase 0.02 Archaeplastida
Solyc02g081990.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g083360.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc03g123620.4.1 No alias pectin methylesterase 0.03 Archaeplastida
Solyc07g064190.3.1 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e007917_P002 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e019069_P001 No alias pectin methylesterase 0.07 Archaeplastida
Zm00001e026790_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e036264_P001 No alias pectin methylesterase 0.03 Archaeplastida
Zm00001e041757_P001 No alias pectin methylesterase 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA Interproscan
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 72 214
IPR000070 Pectinesterase_cat 267 564
No external refs found!