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  5. Zm00001e011254_P001

Zm00001e011254_P001


Description : Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica (sp|q76c99|rf1_orysi : 713.0)


Gene families : OG0001482 (Archaeplastida) Phylogenetic Tree(s): OG0001482_tree ,
OG_05_0000870 (LandPlants) Phylogenetic Tree(s): OG_05_0000870_tree ,
OG_06_0000537 (SeedPlants) Phylogenetic Tree(s): OG_06_0000537_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011254_P001
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
LOC_Os10g35260.1 No alias Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 629 678
IPR002885 Pentatricopeptide_repeat 700 746
IPR002885 Pentatricopeptide_repeat 420 468
IPR002885 Pentatricopeptide_repeat 314 363
IPR002885 Pentatricopeptide_repeat 559 608
IPR002885 Pentatricopeptide_repeat 172 221
IPR002885 Pentatricopeptide_repeat 244 293
IPR002885 Pentatricopeptide_repeat 140 168
IPR002885 Pentatricopeptide_repeat 494 521
IPR002885 Pentatricopeptide_repeat 387 417
IPR002885 Pentatricopeptide_repeat 528 550
No external refs found!