1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e011440_P001

Zm00001e011440_P001


Description : RNA chaperone (RZ1|GR-RBP)


Gene families : OG0000043 (Archaeplastida) Phylogenetic Tree(s): OG0000043_tree ,
OG_05_0000481 (LandPlants) Phylogenetic Tree(s): OG_05_0000481_tree ,
OG_06_0003301 (SeedPlants) Phylogenetic Tree(s): OG_06_0003301_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011440_P001
Cluster HCCA: Cluster_451

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00251200 evm_27.TU.AmTr_v1... Glycine-rich RNA-binding protein RZ1C OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00025p00095750 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00148p00072380 evm_27.TU.AmTr_v1... 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana sylvestris 0.03 Archaeplastida
AT5G19030 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
AT5G50250 CP31B chloroplast RNA-binding protein 31B 0.06 Archaeplastida
GSVIVT01017884001 No alias No description available 0.08 Archaeplastida
LOC_Os03g47800.1 No alias RNA chaperone (RZ1|GR-RBP) 0.02 Archaeplastida
LOC_Os10g17454.1 No alias RNA editing factor (ORRM) 0.02 Archaeplastida
LOC_Os12g31800.1 No alias RNA editing factor (ORRM) 0.08 Archaeplastida
MA_320479g0010 No alias RNA-binding protein CP29B, chloroplastic OS=Arabidopsis... 0.03 Archaeplastida
Pp3c17_4050V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein with... 0.02 Archaeplastida
Smo172546 No alias Glycine-rich RNA-binding protein RZ1A OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo81392 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
Solyc02g088790.3.1 No alias RNA editing factor (ORRM) 0.04 Archaeplastida
Zm00001e005260_P002 No alias RNA chaperone (RZ1|GR-RBP) 0.04 Archaeplastida
Zm00001e010844_P001 No alias 29 kDa ribonucleoprotein A, chloroplastic OS=Nicotiana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 78
IPR001878 Znf_CCHC 141 156
No external refs found!