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  5. Zm00001e011470_P001

Zm00001e011470_P001


Description : transcription factor (MADS/AGL)


Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011470_P001
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00267050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.03 Archaeplastida
AMTR_s00001p00270400 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AMTR_s00002p00262760 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00071p00193200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MADS box... 0.02 Archaeplastida
AT1G69120 AGL7, AP1 K-box region and MADS-box transcription factor family protein 0.02 Archaeplastida
AT4G22950 GL19, AGL19 AGAMOUS-like 19 0.06 Archaeplastida
AT5G60910 AGL8, FUL AGAMOUS-like 8 0.04 Archaeplastida
LOC_Os02g45770.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os05g11380.1 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
LOC_Os08g41950.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
LOC_Os12g31748.2 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
MA_175522g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_6279308g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
MA_78010g0010 No alias transcription factor (MADS/AGL) 0.02 Archaeplastida
Pp3c4_540V3.1 No alias K-box region and MADS-box transcription factor family protein 0.06 Archaeplastida
Solyc02g071730.4.1 No alias transcription factor (MADS/AGL) 0.05 Archaeplastida
Solyc02g089210.4.1 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida
Solyc06g035570.1.1 No alias transcription factor (MADS/AGL) 0.03 Archaeplastida
Zm00001e015728_P001 No alias transcription factor (MADS/AGL) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002100 TF_MADSbox 15 60
No external refs found!