Zm00001e011477_P001


Description : component eIF3i of eIF3 mRNA-to-PIC binding complex


Gene families : OG0003862 (Archaeplastida) Phylogenetic Tree(s): OG0003862_tree ,
OG_05_0004743 (LandPlants) Phylogenetic Tree(s): OG_05_0004743_tree ,
OG_06_0004853 (SeedPlants) Phylogenetic Tree(s): OG_06_0004853_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011477_P001
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021070.64 No alias No description available 0.02 Archaeplastida
GSVIVT01011562001 No alias Protein biosynthesis.translation... 0.03 Archaeplastida
LOC_Os05g16660.2 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.05 Archaeplastida
LOC_Os08g21660.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.08 Archaeplastida
Pp3c14_22340V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Pp3c17_19090V3.1 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Archaeplastida
Solyc11g017070.2.1 No alias component eIF3i of eIF3 mRNA-to-PIC binding complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Neighborhood
CC GO:0005739 mitochondrion IEP Neighborhood
CC GO:0005759 mitochondrial matrix IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006188 IMP biosynthetic process IEP Neighborhood
BP GO:0006189 'de novo' IMP biosynthetic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008536 Ran GTPase binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017016 Ras GTPase binding IEP Neighborhood
MF GO:0031267 small GTPase binding IEP Neighborhood
CC GO:0031974 membrane-enclosed lumen IEP Neighborhood
CC GO:0043233 organelle lumen IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046040 IMP metabolic process IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
MF GO:0051020 GTPase binding IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
CC GO:0070013 intracellular organelle lumen IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 283 314
IPR001680 WD40_repeat 43 79
IPR001680 WD40_repeat 188 219
IPR001680 WD40_repeat 146 174
No external refs found!