AT3G17100


Description : sequence-specific DNA binding transcription factors


Gene families : OG0001291 (Archaeplastida) Phylogenetic Tree(s): OG0001291_tree ,
OG_05_0000813 (LandPlants) Phylogenetic Tree(s): OG_05_0000813_tree ,
OG_06_0000680 (SeedPlants) Phylogenetic Tree(s): OG_06_0000680_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17100
Cluster HCCA: Cluster_249

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00155460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AT3G06590 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
LOC_Os03g19780.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_114710g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_136890g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_29054g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_7709601g0010 No alias No annotation 0.02 Archaeplastida
Zm00001e001479_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of transcription, DNA-templated TAS Interproscan
BP GO:0006598 polyamine catabolic process RCA Interproscan
BP GO:0009698 phenylpropanoid metabolic process RCA Interproscan
BP GO:0009741 response to brassinosteroid RCA Interproscan
BP GO:0042398 cellular modified amino acid biosynthetic process RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Neighborhood
BP GO:0000097 sulfur amino acid biosynthetic process IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
CC GO:0000322 storage vacuole IEP Neighborhood
CC GO:0000326 protein storage vacuole IEP Neighborhood
BP GO:0000902 cell morphogenesis IEP Neighborhood
BP GO:0000904 cell morphogenesis involved in differentiation IEP Neighborhood
BP GO:0001101 response to acid chemical IEP Neighborhood
BP GO:0001558 regulation of cell growth IEP Neighborhood
BP GO:0002832 negative regulation of response to biotic stimulus IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004871 obsolete signal transducer activity IEP Neighborhood
MF GO:0004930 G-protein coupled receptor activity IEP Neighborhood
MF GO:0005275 amine transmembrane transporter activity IEP Neighborhood
MF GO:0005372 water transmembrane transporter activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005769 early endosome IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006163 purine nucleotide metabolic process IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006534 cysteine metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006816 calcium ion transport IEP Neighborhood
BP GO:0006833 water transport IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006970 response to osmotic stress IEP Neighborhood
BP GO:0006972 hyperosmotic response IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007030 Golgi organization IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
BP GO:0007602 phototransduction IEP Neighborhood
MF GO:0008020 G-protein coupled photoreceptor activity IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
BP GO:0008154 actin polymerization or depolymerization IEP Neighborhood
BP GO:0008156 negative regulation of DNA replication IEP Neighborhood
CC GO:0008180 COP9 signalosome IEP Neighborhood
BP GO:0008284 positive regulation of cell proliferation IEP Neighborhood
BP GO:0008356 asymmetric cell division IEP Neighborhood
BP GO:0008361 regulation of cell size IEP Neighborhood
MF GO:0008519 ammonium transmembrane transporter activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
MF GO:0008810 cellulase activity IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0009069 serine family amino acid metabolic process IEP Neighborhood
BP GO:0009070 serine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009150 purine ribonucleotide metabolic process IEP Neighborhood
BP GO:0009314 response to radiation IEP Neighborhood
BP GO:0009411 response to UV IEP Neighborhood
BP GO:0009414 response to water deprivation IEP Neighborhood
BP GO:0009415 response to water IEP Neighborhood
BP GO:0009416 response to light stimulus IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
CC GO:0009531 secondary cell wall IEP Neighborhood
BP GO:0009582 detection of abiotic stimulus IEP Neighborhood
BP GO:0009583 detection of light stimulus IEP Neighborhood
BP GO:0009585 red, far-red light phototransduction IEP Neighborhood
BP GO:0009605 response to external stimulus IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0009628 response to abiotic stimulus IEP Neighborhood
BP GO:0009629 response to gravity IEP Neighborhood
BP GO:0009630 gravitropism IEP Neighborhood
BP GO:0009637 response to blue light IEP Neighborhood
BP GO:0009638 phototropism IEP Neighborhood
BP GO:0009639 response to red or far red light IEP Neighborhood
BP GO:0009641 shade avoidance IEP Neighborhood
BP GO:0009651 response to salt stress IEP Neighborhood
BP GO:0009653 anatomical structure morphogenesis IEP Neighborhood
MF GO:0009672 auxin:proton symporter activity IEP Neighborhood
BP GO:0009733 response to auxin IEP Neighborhood
BP GO:0009739 response to gibberellin IEP Neighborhood
BP GO:0009740 gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009743 response to carbohydrate IEP Neighborhood
BP GO:0009746 response to hexose IEP Neighborhood
BP GO:0009750 response to fructose IEP Neighborhood
BP GO:0009755 hormone-mediated signaling pathway IEP Neighborhood
BP GO:0009785 blue light signaling pathway IEP Neighborhood
BP GO:0009825 multidimensional cell growth IEP Neighborhood
BP GO:0009826 unidimensional cell growth IEP Neighborhood
BP GO:0009832 plant-type cell wall biogenesis IEP Neighborhood
MF GO:0009881 photoreceptor activity IEP Neighborhood
MF GO:0009883 red or far-red light photoreceptor activity IEP Neighborhood
BP GO:0009890 negative regulation of biosynthetic process IEP Neighborhood
BP GO:0009896 positive regulation of catabolic process IEP Neighborhood
BP GO:0009914 hormone transport IEP Neighborhood
BP GO:0009926 auxin polar transport IEP Neighborhood
BP GO:0009932 cell tip growth IEP Neighborhood
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP Neighborhood
BP GO:0009958 positive gravitropism IEP Neighborhood
BP GO:0009966 regulation of signal transduction IEP Neighborhood
CC GO:0009986 cell surface IEP Neighborhood
BP GO:0010015 root morphogenesis IEP Neighborhood
BP GO:0010017 red or far-red light signaling pathway IEP Neighborhood
BP GO:0010035 response to inorganic substance IEP Neighborhood
BP GO:0010038 response to metal ion IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010082 regulation of root meristem growth IEP Neighborhood
BP GO:0010099 regulation of photomorphogenesis IEP Neighborhood
BP GO:0010114 response to red light IEP Neighborhood
BP GO:0010155 regulation of proton transport IEP Neighborhood
BP GO:0010161 red light signaling pathway IEP Neighborhood
BP GO:0010162 seed dormancy process IEP Neighborhood
BP GO:0010187 negative regulation of seed germination IEP Neighborhood
BP GO:0010193 response to ozone IEP Neighborhood
BP GO:0010201 response to continuous far red light stimulus by the high-irradiance response system IEP Neighborhood
BP GO:0010203 response to very low fluence red light stimulus IEP Neighborhood
BP GO:0010218 response to far red light IEP Neighborhood
BP GO:0010232 vascular transport IEP Neighborhood
BP GO:0010233 phloem transport IEP Neighborhood
BP GO:0010315 auxin efflux IEP Neighborhood
BP GO:0010325 raffinose family oligosaccharide biosynthetic process IEP Neighborhood
BP GO:0010476 gibberellin mediated signaling pathway IEP Neighborhood
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010583 response to cyclopentenone IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010646 regulation of cell communication IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0010928 regulation of auxin mediated signaling pathway IEP Neighborhood
BP GO:0010948 negative regulation of cell cycle process IEP Neighborhood
CC GO:0012506 vesicle membrane IEP Neighborhood
MF GO:0015101 organic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015200 methylammonium transmembrane transporter activity IEP Neighborhood
MF GO:0015204 urea transmembrane transporter activity IEP Neighborhood
MF GO:0015250 water channel activity IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015840 urea transport IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016049 cell growth IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
CC GO:0016328 lateral plasma membrane IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0017001 antibiotic catabolic process IEP Neighborhood
BP GO:0017148 negative regulation of translation IEP Neighborhood
BP GO:0019344 cysteine biosynthetic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0019755 one-carbon compound transport IEP Neighborhood
BP GO:0021700 developmental maturation IEP Neighborhood
BP GO:0022611 dormancy process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
BP GO:0023051 regulation of signaling IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030041 actin filament polymerization IEP Neighborhood
BP GO:0030104 water homeostasis IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
BP GO:0030162 regulation of proteolysis IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0030308 negative regulation of cell growth IEP Neighborhood
BP GO:0030522 intracellular receptor signaling pathway IEP Neighborhood
BP GO:0030865 cortical cytoskeleton organization IEP Neighborhood
BP GO:0031122 cytoplasmic microtubule organization IEP Neighborhood
BP GO:0031327 negative regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0031329 regulation of cellular catabolic process IEP Neighborhood
BP GO:0031331 positive regulation of cellular catabolic process IEP Neighborhood
MF GO:0031516 far-red light photoreceptor activity IEP Neighborhood
BP GO:0032102 negative regulation of response to external stimulus IEP Neighborhood
MF GO:0032182 ubiquitin-like protein binding IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032434 regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0032535 regulation of cellular component size IEP Neighborhood
BP GO:0032875 regulation of DNA endoreduplication IEP Neighborhood
BP GO:0032876 negative regulation of DNA endoreduplication IEP Neighborhood
BP GO:0032879 regulation of localization IEP Neighborhood
BP GO:0032880 regulation of protein localization IEP Neighborhood
BP GO:0032989 cellular component morphogenesis IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034249 negative regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034284 response to monosaccharide IEP Neighborhood
BP GO:0034762 regulation of transmembrane transport IEP Neighborhood
BP GO:0034765 regulation of ion transmembrane transport IEP Neighborhood
BP GO:0040007 growth IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042044 fluid transport IEP Neighborhood
BP GO:0042127 regulation of cell proliferation IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
BP GO:0042538 hyperosmotic salinity response IEP Neighborhood
BP GO:0042546 cell wall biogenesis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0042743 hydrogen peroxide metabolic process IEP Neighborhood
BP GO:0042744 hydrogen peroxide catabolic process IEP Neighborhood
CC GO:0042807 central vacuole IEP Neighborhood
BP GO:0042891 antibiotic transport IEP Neighborhood
MF GO:0043130 ubiquitin binding IEP Neighborhood
BP GO:0043269 regulation of ion transport IEP Neighborhood
BP GO:0043473 pigmentation IEP Neighborhood
BP GO:0043476 pigment accumulation IEP Neighborhood
BP GO:0043478 pigment accumulation in response to UV light IEP Neighborhood
BP GO:0043479 pigment accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043480 pigment accumulation in tissues IEP Neighborhood
BP GO:0043481 anthocyanin accumulation in tissues in response to UV light IEP Neighborhood
BP GO:0043622 cortical microtubule organization IEP Neighborhood
CC GO:0043674 columella IEP Neighborhood
BP GO:0043901 negative regulation of multi-organism process IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044272 sulfur compound biosynthetic process IEP Neighborhood
CC GO:0044462 external encapsulating structure part IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0045732 positive regulation of protein catabolic process IEP Neighborhood
BP GO:0045862 positive regulation of proteolysis IEP Neighborhood
BP GO:0045926 negative regulation of growth IEP Neighborhood
BP GO:0046686 response to cadmium ion IEP Neighborhood
BP GO:0046777 protein autophosphorylation IEP Neighborhood
BP GO:0048469 cell maturation IEP Neighborhood
BP GO:0048588 developmental cell growth IEP Neighborhood
BP GO:0048589 developmental growth IEP Neighborhood
BP GO:0048609 multicellular organismal reproductive process IEP Neighborhood
BP GO:0048764 trichoblast maturation IEP Neighborhood
BP GO:0048765 root hair cell differentiation IEP Neighborhood
BP GO:0048766 root hair initiation IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048768 root hair cell tip growth IEP Neighborhood
BP GO:0048869 cellular developmental process IEP Neighborhood
BP GO:0050793 regulation of developmental process IEP Neighborhood
BP GO:0051049 regulation of transport IEP Neighborhood
BP GO:0051053 negative regulation of DNA metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051181 cofactor transport IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051239 regulation of multicellular organismal process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051513 regulation of monopolar cell growth IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
BP GO:0052541 plant-type cell wall cellulose metabolic process IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0055122 response to very low light intensity stimulus IEP Neighborhood
BP GO:0060560 developmental growth involved in morphogenesis IEP Neighborhood
BP GO:0060918 auxin transport IEP Neighborhood
BP GO:0061136 regulation of proteasomal protein catabolic process IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0070628 proteasome binding IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0071214 cellular response to abiotic stimulus IEP Neighborhood
BP GO:0071478 cellular response to radiation IEP Neighborhood
BP GO:0071482 cellular response to light stimulus IEP Neighborhood
BP GO:0071483 cellular response to blue light IEP Neighborhood
BP GO:0071489 cellular response to red or far red light IEP Neighborhood
BP GO:0071491 cellular response to red light IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
BP GO:0071669 plant-type cell wall organization or biogenesis IEP Neighborhood
BP GO:0071695 anatomical structure maturation IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
BP GO:0072521 purine-containing compound metabolic process IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood
BP GO:0080050 regulation of seed development IEP Neighborhood
MF GO:0080161 auxin transmembrane transporter activity IEP Neighborhood
BP GO:0080170 hydrogen peroxide transmembrane transport IEP Neighborhood
BP GO:0090066 regulation of anatomical structure size IEP Neighborhood
BP GO:0090329 regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
BP GO:0097435 supramolecular fiber organization IEP Neighborhood
BP GO:0104004 cellular response to environmental stimulus IEP Neighborhood
BP GO:1900424 regulation of defense response to bacterium IEP Neighborhood
BP GO:1900425 negative regulation of defense response to bacterium IEP Neighborhood
BP GO:1901483 regulation of transcription factor catabolic process IEP Neighborhood
BP GO:1901485 positive regulation of transcription factor catabolic process IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
BP GO:1901607 alpha-amino acid biosynthetic process IEP Neighborhood
BP GO:1901800 positive regulation of proteasomal protein catabolic process IEP Neighborhood
BP GO:1903050 regulation of proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1903052 positive regulation of proteolysis involved in cellular protein catabolic process IEP Neighborhood
BP GO:1903362 regulation of cellular protein catabolic process IEP Neighborhood
BP GO:1903364 positive regulation of cellular protein catabolic process IEP Neighborhood
BP GO:1904062 regulation of cation transmembrane transport IEP Neighborhood
BP GO:1905392 plant organ morphogenesis IEP Neighborhood
BP GO:2000026 regulation of multicellular organismal development IEP Neighborhood
BP GO:2000033 regulation of seed dormancy process IEP Neighborhood
BP GO:2000034 regulation of seed maturation IEP Neighborhood
BP GO:2000038 regulation of stomatal complex development IEP Neighborhood
BP GO:2000058 regulation of ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:2000060 positive regulation of ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:2000104 negative regulation of DNA-dependent DNA replication IEP Neighborhood
BP GO:2000113 negative regulation of cellular macromolecule biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!