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  5. Zm00001e011638_P001

Zm00001e011638_P001


Description : component CPSF73/Ysh1 of Cleavage and Polyadenylation Specificity Factor (CPSF) complex. nuclease CPSF73-I


Gene families : OG0001402 (Archaeplastida) Phylogenetic Tree(s): OG0001402_tree ,
OG_05_0004701 (LandPlants) Phylogenetic Tree(s): OG_05_0004701_tree ,
OG_06_0005331 (SeedPlants) Phylogenetic Tree(s): OG_06_0005331_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011638_P001
Cluster HCCA: Cluster_346

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00266610 evm_27.TU.AmTr_v1... RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.02 Archaeplastida
GSVIVT01023351001 No alias RNA processing.RNA 3-end polyadenylation.Cleavage and... 0.03 Archaeplastida
MA_45580g0010 No alias component CPSF73/Ysh1 of Cleavage and Polyadenylation... 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001279 Metallo-B-lactamas 42 204
IPR022712 Beta_Casp 262 383
IPR021718 CPSF73-100_C 496 688
IPR011108 RMMBL 397 454
No external refs found!