1. Home
  2. Species
  3. Zea mays
  4. Sequence
  5. Zm00001e011669_P002

Zm00001e011669_P002


Description : Prolycopene isomerase, chloroplastic OS=Daucus carota (sp|q2vex9|crtso_dauca : 190.0)


Gene families : OG0002780 (Archaeplastida) Phylogenetic Tree(s): OG0002780_tree ,
OG_05_0003783 (LandPlants) Phylogenetic Tree(s): OG_05_0003783_tree ,
OG_06_0007541 (SeedPlants) Phylogenetic Tree(s): OG_06_0007541_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011669_P002
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00071p00187330 evm_27.TU.AmTr_v1... Prolycopene isomerase, chloroplastic OS=Daucus carota 0.04 Archaeplastida
AT1G57770 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.07 Archaeplastida
Cpa|evm.model.tig00001258.10 No alias No description available 0.06 Archaeplastida
Cpa|evm.model.tig00020723.8 No alias No description available 0.06 Archaeplastida
Cre09.g407200 No alias Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.08 Archaeplastida
Cre16.g674950 No alias Prolycopene isomerase, chloroplastic OS=Solanum lycopersicum 0.01 Archaeplastida
GSVIVT01023233001 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota 0.06 Archaeplastida
Gb_39487 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.04 Archaeplastida
Gb_39488 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g62510.1 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.14 Archaeplastida
MA_10428345g0020 No alias Prolycopene isomerase, chloroplastic OS=Arabidopsis... 0.12 Archaeplastida
MA_10428660g0010 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.12 Archaeplastida
Pp3c2_2830V3.1 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.04 Archaeplastida
Pp3c8_1640V3.1 No alias FAD/NAD(P)-binding oxidoreductase family protein 0.05 Archaeplastida
Smo229587 No alias Prolycopene isomerase 1, chloroplastic OS=Oncidium... 0.05 Archaeplastida
Solyc05g010180.4.1 No alias Prolycopene isomerase, chloroplastic OS=Daucus carota... 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Neighborhood
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004197 cysteine-type endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
BP GO:0006720 isoprenoid metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0008299 isoprenoid biosynthetic process IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016485 protein processing IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0017004 cytochrome complex assembly IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
MF GO:0022804 active transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0051604 protein maturation IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
MF GO:0070402 NADPH binding IEP Neighborhood
BP GO:0071586 CAAX-box protein processing IEP Neighborhood
MF GO:0140098 catalytic activity, acting on RNA IEP Neighborhood
MF GO:0140101 catalytic activity, acting on a tRNA IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR002937 Amino_oxidase 80 576
No external refs found!