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  5. Zm00001e011790_P001

Zm00001e011790_P001


Description : ARF-GTPase


Gene families : OG0000310 (Archaeplastida) Phylogenetic Tree(s): OG0000310_tree ,
OG_05_0000213 (LandPlants) Phylogenetic Tree(s): OG_05_0000213_tree ,
OG_06_0000536 (SeedPlants) Phylogenetic Tree(s): OG_06_0000536_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011790_P001
Cluster HCCA: Cluster_166

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00096p00110370 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.02 Archaeplastida
AT1G70490 ARFA1D, ATARFA1D Ras-related small GTP-binding family protein 0.04 Archaeplastida
AT2G15310 ATARFB1A, ARFB1A ADP-ribosylation factor B1A 0.02 Archaeplastida
AT2G47170 ARF1A1C Ras-related small GTP-binding family protein 0.03 Archaeplastida
AT3G03120 ATARFB1C, ARFB1C ADP-ribosylation factor B1C 0.03 Archaeplastida
Cpa|evm.model.tig00000663.21 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
Cpa|evm.model.tig00021127.129 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.06 Archaeplastida
Cre12.g486250 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Cre12.g487850 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 Archaeplastida
GSVIVT01000224001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.03 Archaeplastida
GSVIVT01028179001 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.04 Archaeplastida
Gb_25641 No alias ARF-GTPase 0.03 Archaeplastida
LOC_Os05g41060.1 No alias ARF-GTPase 0.03 Archaeplastida
MA_101085g0010 No alias ARF-GTPase 0.03 Archaeplastida
MA_10205704g0010 No alias No annotation 0.02 Archaeplastida
MA_4349g0020 No alias ARF-GTPase 0.02 Archaeplastida
Mp4g04230.1 No alias ARF-GTPase 0.04 Archaeplastida
Mp8g07320.1 No alias ARF-GTPase 0.06 Archaeplastida
Pp3c10_20740V3.1 No alias ADP-ribosylation factor A1E 0.09 Archaeplastida
Pp3c10_25070V3.1 No alias ADP-ribosylation factor A1F 0.03 Archaeplastida
Pp3c12_14945V3.1 No alias ADP-ribosylation factor A1E 0.05 Archaeplastida
Pp3c12_9900V3.1 No alias ADP-ribosylation factor B1C 0.02 Archaeplastida
Pp3c3_20930V3.1 No alias ADP-ribosylation factor B1B 0.03 Archaeplastida
Pp3c4_20580V3.1 No alias ADP-ribosylation factor A1E 0.03 Archaeplastida
Pp3c4_20623V3.1 No alias ADP-ribosylation factor A1E 0.04 Archaeplastida
Solyc01g008000.3.1 No alias ARF-GTPase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR006689 Small_GTPase_ARF/SAR 27 199
No external refs found!