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  5. Zm00001e011866_P002

Zm00001e011866_P002


Description : transcription factor (bHLH)


Gene families : OG0000051 (Archaeplastida) Phylogenetic Tree(s): OG0000051_tree ,
OG_05_0000521 (LandPlants) Phylogenetic Tree(s): OG_05_0000521_tree ,
OG_06_0000874 (SeedPlants) Phylogenetic Tree(s): OG_06_0000874_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011866_P002
Cluster HCCA: Cluster_278

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00267570 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AMTR_s00065p00184910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AT1G10120 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G26260 CIB5 cryptochrome-interacting basic-helix-loop-helix 5 0.02 Archaeplastida
AT2G42280 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G02590 UNE12 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT5G62610 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
GSVIVT01013553001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01021787001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01023783001 No alias External stimuli response.light.UV-A/blue... 0.03 Archaeplastida
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01026056001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
Gb_20300 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Gb_28850 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_36369 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 Archaeplastida
LOC_Os01g67480.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os04g41229.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os07g08440.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os08g39630.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os09g25040.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
MA_158362g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
MA_182616g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
MA_3940g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Mp6g18480.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.02 Archaeplastida
Mpzg01410.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c19_11400V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c21_14114V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c4_3920V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Solyc03g113560.4.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc04g005220.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc04g077480.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.08 Archaeplastida
Solyc05g006650.3.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Solyc07g005400.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc09g057710.4.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.05 Archaeplastida
Solyc12g100140.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e009823_P002 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e010016_P002 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 Archaeplastida
Zm00001e010060_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e016117_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e018946_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 197 241
No external refs found!