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  5. Zm00001e011930_P001

Zm00001e011930_P001


Description : no hits & (original description: none)


Gene families : OG0001801 (Archaeplastida) Phylogenetic Tree(s): OG0001801_tree ,
OG_05_0001383 (LandPlants) Phylogenetic Tree(s): OG_05_0001383_tree ,
OG_06_0002075 (SeedPlants) Phylogenetic Tree(s): OG_06_0002075_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e011930_P001
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00158580 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00147p00098270 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT3G12870 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.1 Archaeplastida
AT5G56120 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.08 Archaeplastida
LOC_Os03g56700.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g38760.1 No alias no hits & (original description: none) 0.08 Archaeplastida
LOC_Os08g38790.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10426247g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_457405g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c3_23280V3.1 No alias No annotation 0.02 Archaeplastida
Solyc07g066040.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc07g066540.1.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Zm00001e005688_P001 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
MF GO:0008092 cytoskeletal protein binding IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!