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  5. AT3G17490

AT3G17490


Description : F-box and associated interaction domains-containing protein


Gene families : OG0000467 (Archaeplastida) Phylogenetic Tree(s): OG0000467_tree ,
OG_05_0000234 (LandPlants) Phylogenetic Tree(s): OG_05_0000234_tree ,
OG_06_0000102 (SeedPlants) Phylogenetic Tree(s): OG_06_0000102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17490
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AT1G11620 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G27490 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT1G32140 No alias F-box family protein 0.04 Archaeplastida
AT1G62270 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT1G66490 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT2G24510 No alias F-box associated ubiquitination effector family protein 0.04 Archaeplastida
AT3G04250 No alias F-box associated ubiquitination effector family protein 0.02 Archaeplastida
AT3G17500 No alias F-box family protein 0.03 Archaeplastida
AT3G17540 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G17570 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT3G19880 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G19890 No alias F-box family protein 0.03 Archaeplastida
AT3G21120 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT3G22350 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida
AT3G24580 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT3G25090 No alias F-box associated ubiquitination effector family protein 0.03 Archaeplastida
AT3G25460 No alias F-box and associated interaction domains-containing protein 0.02 Archaeplastida
AT4G33290 No alias F-box and associated interaction domains-containing protein 0.05 Archaeplastida
AT5G41500 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT5G41510 No alias F-box and associated interaction domains-containing protein 0.03 Archaeplastida
AT5G47300 No alias F-box and associated interaction domains-containing protein 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000076 DNA replication checkpoint IEP Neighborhood
BP GO:0000280 nuclear division IEP Neighborhood
BP GO:0000712 resolution of meiotic recombination intermediates IEP Neighborhood
MF GO:0003725 double-stranded RNA binding IEP Neighborhood
MF GO:0004743 pyruvate kinase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
BP GO:0007140 male meiotic nuclear division IEP Neighborhood
BP GO:0007143 female meiotic nuclear division IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0060341 regulation of cellular localization IEP Neighborhood
BP GO:0080154 regulation of fertilization IEP Neighborhood
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP Neighborhood
BP GO:0140013 meiotic nuclear division IEP Neighborhood
BP GO:1903827 regulation of cellular protein localization IEP Neighborhood
BP GO:2000008 regulation of protein localization to cell surface IEP Neighborhood
InterPro domains Description Start Stop
IPR001810 F-box_dom 4 45
IPR006527 F-box-assoc_dom_typ1 201 366
No external refs found!