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  5. Zm00001e012122_P001

Zm00001e012122_P001


Description : transcription factor (bHLH). bHLH-IVa-class iron homeostasis regulator


Gene families : OG0001334 (Archaeplastida) Phylogenetic Tree(s): OG0001334_tree ,
OG_05_0001220 (LandPlants) Phylogenetic Tree(s): OG_05_0001220_tree ,
OG_06_0002606 (SeedPlants) Phylogenetic Tree(s): OG_06_0002606_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012122_P001
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AT2G22760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT2G22770 NAI1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
GSVIVT01002833001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01003697001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01003698001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
GSVIVT01003701001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01004409001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01036959001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.08 Archaeplastida
Gb_10697 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_13728 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida
LOC_Os03g46860.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida
LOC_Os03g51580.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.02 Archaeplastida
LOC_Os12g43620.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida
MA_97308g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc01g106460.4.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.05 Archaeplastida
Solyc02g091800.4.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida
Solyc02g091810.2.1 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.04 Archaeplastida
Solyc05g009640.4.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e005177_P001 No alias No annotation 0.06 Archaeplastida
Zm00001e005533_P001 No alias transcription factor (bHLH). bHLH-IVa-class iron... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004222 metalloendopeptidase activity IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008237 metallopeptidase activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031012 extracellular matrix IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0044421 extracellular region part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050661 NADP binding IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 161 208
No external refs found!