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  5. Zm00001e012276_P001

Zm00001e012276_P001


Description : Protein argonaute 12 OS=Oryza sativa subsp. japonica (sp|q7y001|ago12_orysj : 1335.0)


Gene families : OG0000124 (Archaeplastida) Phylogenetic Tree(s): OG0000124_tree ,
OG_05_0000677 (LandPlants) Phylogenetic Tree(s): OG_05_0000677_tree ,
OG_06_0000508 (SeedPlants) Phylogenetic Tree(s): OG_06_0000508_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012276_P001
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Mp6g20400.1 No alias siRNA-integrating factor (AGO) 0.03 Archaeplastida
Pp3c2_4060V3.1 No alias Stabilizer of iron transporter SufD / Polynucleotidyl transferase 0.03 Archaeplastida
Solyc06g074730.4.1 No alias Protein argonaute 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc07g049500.3.1 No alias siRNA-integrating factor (AGO) 0.02 Archaeplastida
Solyc12g006790.3.1 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.02 Archaeplastida
Zm00001e037347_P002 No alias RIS-Complex miRNA recruiting factor (AGO1) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0000278 mitotic cell cycle IEP Neighborhood
CC GO:0000775 chromosome, centromeric region IEP Neighborhood
CC GO:0000808 origin recognition complex IEP Neighborhood
MF GO:0004497 monooxygenase activity IEP Neighborhood
MF GO:0004506 squalene monooxygenase activity IEP Neighborhood
MF GO:0004609 phosphatidylserine decarboxylase activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0007049 cell cycle IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0019637 organophosphate metabolic process IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
CC GO:0098687 chromosomal region IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
InterPro domains Description Start Stop
IPR032474 Argonaute_N 203 334
IPR032472 ArgoL2 534 580
IPR014811 ArgoL1 344 394
IPR032473 Argonaute_Mid_dom 590 669
IPR003165 Piwi 687 1014
IPR003100 PAZ_dom 406 523
No external refs found!