Zm00001e012296_P001

Description : endo-beta-1,4-xylanase

Gene families : OG0003136 (Archaeplastida) Phylogenetic Tree(s): OG0003136_tree ,
OG_05_0004269 (LandPlants) Phylogenetic Tree(s): OG_05_0004269_tree ,
OG_06_0004372 (SeedPlants) Phylogenetic Tree(s): OG_06_0004372_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e012296_P001
Cluster	HCCA: Cluster_289

Target	Alias	Description	ECC score	Gene Family Method
AT1G58370	ATXYN1, RXF12	glycosyl hydrolase family 10 protein /...	0.05	Archaeplastida
AT4G08160	No alias	glycosyl hydrolase family 10 protein /...	0.04	Archaeplastida
LOC_Os01g04300.1	No alias	endo-beta-1,4-xylanase	0.04	Archaeplastida
LOC_Os03g47010.1	No alias	endo-beta-1,4-xylanase	0.07	Archaeplastida
MA_9039435g0010	No alias	No annotation	0.06	Archaeplastida
Solyc04g077190.4.1	No alias	endo-beta-1,4-xylanase	0.05	Archaeplastida
Zm00001e014621_P001	No alias	endo-beta-1,4-xylanase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEA	Interproscan
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004518	nuclease activity	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
BP	GO:0006308	DNA catabolic process	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
BP	GO:0019439	aromatic compound catabolic process	IEP	Neighborhood
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	Neighborhood
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Neighborhood
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	Neighborhood
MF	GO:0045735	nutrient reservoir activity	IEP	Neighborhood
BP	GO:0046700	heterocycle catabolic process	IEP	Neighborhood
BP	GO:1901361	organic cyclic compound catabolic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003305	CenC_carb-bd	18	161
IPR003305	CenC_carb-bd	195	341
IPR001000	GH10	405	662

External Links

No external refs found!