AT3G17690 (CNGC19, ATCNGC19)

Aliases : CNGC19, ATCNGC19

Description : cyclic nucleotide gated channel 19

Gene families : OG0000137 (Archaeplastida) Phylogenetic Tree(s): OG0000137_tree ,
OG_05_0002629 (LandPlants) Phylogenetic Tree(s): OG_05_0002629_tree ,
OG_06_0001915 (SeedPlants) Phylogenetic Tree(s): OG_06_0001915_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G17690
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
AT1G15990	CNGC7, ATCNGC7	cyclic nucleotide gated channel 7	0.02	Archaeplastida
AT2G28260	CNGC15, ATCNGC15	cyclic nucleotide-gated channel 15	0.05	Archaeplastida
AT3G17700	ATCNGC20, CNGC20, CNBT1	cyclic nucleotide-binding transporter 1	0.03	Archaeplastida
AT4G01010	ATCNGC13, CNGC13	cyclic nucleotide-gated channel 13	0.03	Archaeplastida
Cpa\|evm.model.tig00021319.15	No alias	No description available	0.01	Archaeplastida
MA_11172g0010	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
Pp3c15_11518V3.1	No alias	Cyclic nucleotide-regulated ion channel family protein	0.03	Archaeplastida
Pp3c15_680V3.1	No alias	cyclic nucleotide gated channel 9	0.04	Archaeplastida
Smo266723	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.02	Archaeplastida
Smo89324	No alias	Solute transport.channels.VIC superfamily.cyclic...	0.03	Archaeplastida
Solyc05g050350.2.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.02	Archaeplastida
Solyc09g007840.3.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.04	Archaeplastida
Solyc10g006800.4.1	No alias	cyclic nucleotide-gated cation channel (CNGC)	0.06	Archaeplastida
Zm00001e005735_P001	No alias	no hits & (original description: none)	0.06	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030551	cyclic nucleotide binding	ISS	Interproscan
MF	GO:0036094	small molecule binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000160	phosphorelay signal transduction system	IEP	Neighborhood
MF	GO:0005102	signaling receptor binding	IEP	Neighborhood
MF	GO:0005509	calcium ion binding	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
MF	GO:0005544	calcium-dependent phospholipid binding	IEP	Neighborhood
BP	GO:0006817	phosphate ion transport	IEP	Neighborhood
BP	GO:0009692	ethylene metabolic process	IEP	Neighborhood
BP	GO:0009693	ethylene biosynthetic process	IEP	Neighborhood
BP	GO:0009873	ethylene-activated signaling pathway	IEP	Neighborhood
BP	GO:0009987	cellular process	IEP	Neighborhood
BP	GO:0010185	regulation of cellular defense response	IEP	Neighborhood
BP	GO:0010186	positive regulation of cellular defense response	IEP	Neighborhood
BP	GO:0010193	response to ozone	IEP	Neighborhood
BP	GO:0010286	heat acclimation	IEP	Neighborhood
BP	GO:0016036	cellular response to phosphate starvation	IEP	Neighborhood
BP	GO:0031349	positive regulation of defense response	IEP	Neighborhood
BP	GO:0033037	polysaccharide localization	IEP	Neighborhood
BP	GO:0033554	cellular response to stress	IEP	Neighborhood
MF	GO:0033612	receptor serine/threonine kinase binding	IEP	Neighborhood
BP	GO:0042493	response to drug	IEP	Neighborhood
MF	GO:0043167	ion binding	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
MF	GO:0043169	cation binding	IEP	Neighborhood
BP	GO:0043449	cellular alkene metabolic process	IEP	Neighborhood
BP	GO:0043450	alkene biosynthetic process	IEP	Neighborhood
MF	GO:0046872	metal ion binding	IEP	Neighborhood
BP	GO:0048584	positive regulation of response to stimulus	IEP	Neighborhood
BP	GO:0050896	response to stimulus	IEP	Neighborhood
BP	GO:0051716	cellular response to stimulus	IEP	Neighborhood
BP	GO:0052542	defense response by callose deposition	IEP	Neighborhood
BP	GO:0052545	callose localization	IEP	Neighborhood
BP	GO:0060548	negative regulation of cell death	IEP	Neighborhood
MF	GO:0070696	transmembrane receptor protein serine/threonine kinase binding	IEP	Neighborhood
BP	GO:1900673	olefin metabolic process	IEP	Neighborhood
BP	GO:1900674	olefin biosynthetic process	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005821	Ion_trans_dom	172	489

External Links

No external refs found!

AT3G17690 (CNGC19, ATCNGC19)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation