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  5. Zm00001e012419_P002

Zm00001e012419_P002


Description : VAN3-binding protein OS=Arabidopsis thaliana (sp|q8w4k5|vab_arath : 140.0)


Gene families : OG0001229 (Archaeplastida) Phylogenetic Tree(s): OG0001229_tree ,
OG_05_0000856 (LandPlants) Phylogenetic Tree(s): OG_05_0000856_tree ,
OG_06_0001397 (SeedPlants) Phylogenetic Tree(s): OG_06_0001397_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012419_P002
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AT3G63300 FKD1 FORKED 1 0.07 Archaeplastida
AT4G17350 No alias Plant protein of unknown function (DUF828) with plant... 0.02 Archaeplastida
AT4G32780 No alias phosphoinositide binding 0.02 Archaeplastida
AT5G43870 No alias Plant protein of unknown function (DUF828) with plant... 0.03 Archaeplastida
AT5G47440 No alias Plant protein of unknown function (DUF828) with plant... 0.03 Archaeplastida
GSVIVT01035642001 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_33098 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g41140.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo268691 No alias VAN3-binding protein OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc08g066860.2.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc08g078500.3.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc09g065590.3.1 No alias VAN3-binding protein OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
CC GO:0005618 cell wall IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
CC GO:0030312 external encapsulating structure IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
CC GO:0048046 apoplast IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR013666 PH_pln 357 388
IPR008546 DUF828 19 295
No external refs found!