Zm00001e012441_P002

Description : no hits & (original description: none)

Gene families : OG0002267 (Archaeplastida) Phylogenetic Tree(s): OG0002267_tree ,
OG_05_0010936 (LandPlants) Phylogenetic Tree(s): OG_05_0010936_tree ,
OG_06_0010890 (SeedPlants) Phylogenetic Tree(s): OG_06_0010890_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e012441_P002
Cluster	HCCA: Cluster_261

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00047p00127900	evm_27.TU.AmTr_v1...	No description available	0.02	Archaeplastida
AT4G23620	No alias	Ribosomal protein L25/Gln-tRNA synthetase,...	0.08	Archaeplastida
AT5G66860	No alias	Ribosomal protein L25/Gln-tRNA synthetase,...	0.05	Archaeplastida
Cre02.g081450	No alias	No description available	0.05	Archaeplastida
Gb_39985	No alias	no hits & (original description: none)	0.12	Archaeplastida
Gb_39986	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os01g41030.1	No alias	no hits & (original description: none)	0.09	Archaeplastida
LOC_Os03g41612.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os05g18750.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
MA_10435643g0010	No alias	no hits & (original description: none)	0.05	Archaeplastida
Mp5g00210.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
Pp3c24_15540V3.1	No alias	Ribosomal protein L25/Gln-tRNA synthetase,...	0.07	Archaeplastida
Smo409933	No alias	No description available	0.04	Archaeplastida
Solyc02g090420.2.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc11g018560.2.1	No alias	no hits & (original description: none)	0.09	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
MF	GO:0008097	5S rRNA binding	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019843	rRNA binding	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Neighborhood
CC	GO:0005741	mitochondrial outer membrane	IEP	Neighborhood
CC	GO:0005759	mitochondrial matrix	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
BP	GO:0016070	RNA metabolic process	IEP	Neighborhood
CC	GO:0019867	outer membrane	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
CC	GO:0031090	organelle membrane	IEP	Neighborhood
CC	GO:0031966	mitochondrial membrane	IEP	Neighborhood
CC	GO:0031968	organelle outer membrane	IEP	Neighborhood
CC	GO:0031974	membrane-enclosed lumen	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
CC	GO:0043233	organelle lumen	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
CC	GO:0044422	organelle part	IEP	Neighborhood
CC	GO:0044429	mitochondrial part	IEP	Neighborhood
CC	GO:0044446	intracellular organelle part	IEP	Neighborhood
CC	GO:0070013	intracellular organelle lumen	IEP	Neighborhood
BP	GO:0071840	cellular component organization or biogenesis	IEP	Neighborhood
CC	GO:0098588	bounding membrane of organelle	IEP	Neighborhood
CC	GO:0098805	whole membrane	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR020057	Ribosomal_L25_b-dom	190	274
IPR029751	Ribosomal_L25	77	176

External Links

No external refs found!

Zm00001e012441_P002

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation