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  5. Zm00001e012540_P001

Zm00001e012540_P001


Description : transcription factor (Trihelix)


Gene families : OG0000662 (Archaeplastida) Phylogenetic Tree(s): OG0000662_tree ,
OG_05_0000467 (LandPlants) Phylogenetic Tree(s): OG_05_0000467_tree ,
OG_06_0000568 (SeedPlants) Phylogenetic Tree(s): OG_06_0000568_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012540_P001
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AT1G33240 AT-GTL1, GTL1, AT-GTL2 GT-2-like 1 0.04 Archaeplastida
AT1G76880 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
AT3G10000 EDA31 Homeodomain-like superfamily protein 0.04 Archaeplastida
AT5G03680 PTL Duplicated homeodomain-like superfamily protein 0.04 Archaeplastida
GSVIVT01019722001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.06 Archaeplastida
GSVIVT01034705001 No alias RNA biosynthesis.transcriptional activation.Trihelix... 0.04 Archaeplastida
LOC_Os02g01380.1 No alias transcription factor (Trihelix) 0.04 Archaeplastida
LOC_Os02g43300.1 No alias transcription factor (Trihelix) 0.02 Archaeplastida
LOC_Os03g02240.1 No alias transcription factor (Trihelix) 0.16 Archaeplastida
LOC_Os04g45750.1 No alias transcription factor (Trihelix) 0.1 Archaeplastida
LOC_Os10g37240.4 No alias Trihelix transcription factor GT-2 OS=Arabidopsis... 0.07 Archaeplastida
MA_10427500g0020 No alias transcription factor (Trihelix) 0.03 Archaeplastida
MA_10427500g0030 No alias Trihelix transcription factor GTL1 OS=Arabidopsis... 0.03 Archaeplastida
MA_10433499g0020 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_47951g0010 No alias transcription factor (Trihelix) 0.03 Archaeplastida
MA_79619g0010 No alias transcription factor (Trihelix) 0.04 Archaeplastida
MA_934266g0010 No alias transcription factor (Trihelix) 0.05 Archaeplastida
MA_934266g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp8g08100.1 No alias transcription factor (Trihelix) 0.04 Archaeplastida
Pp3c21_18550V3.1 No alias Duplicated homeodomain-like superfamily protein 0.03 Archaeplastida
Solyc11g005380.2.1 No alias transcription factor (Trihelix) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Neighborhood
MF GO:0019104 DNA N-glycosylase activity IEP Neighborhood
MF GO:0030599 pectinesterase activity IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0042545 cell wall modification IEP Neighborhood
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Neighborhood
BP GO:0045229 external encapsulating structure organization IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0052689 carboxylic ester hydrolase activity IEP Neighborhood
BP GO:0071554 cell wall organization or biogenesis IEP Neighborhood
BP GO:0071555 cell wall organization IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!