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  5. Zm00001e012560_P001

Zm00001e012560_P001


Description : actin filament protein


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012560_P001
Cluster HCCA: Cluster_111

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00088410 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.06 Archaeplastida
AMTR_s00062p00184900 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.05 Archaeplastida
AT1G49240 ACT8 actin 8 0.03 Archaeplastida
Cpa|evm.model.tig00020904.106 No alias Actin-2 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_04045 No alias actin filament protein 0.03 Archaeplastida
Gb_08812 No alias actin filament protein 0.02 Archaeplastida
Gb_24792 No alias actin filament protein 0.04 Archaeplastida
Gb_25131 No alias actin filament protein 0.05 Archaeplastida
LOC_Os01g64630.4 No alias actin filament protein 0.03 Archaeplastida
LOC_Os03g61970.1 No alias actin filament protein 0.02 Archaeplastida
LOC_Os10g36650.1 No alias actin filament protein 0.07 Archaeplastida
Mp6g11010.1 No alias actin filament protein 0.02 Archaeplastida
Smo178381 No alias Cytoskeleton.microfilament network.actin filament protein 0.02 Archaeplastida
Solyc04g011500.3.1 No alias actin filament protein 0.03 Archaeplastida
Solyc06g076090.3.1 No alias actin filament protein 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Neighborhood
MF GO:0003777 microtubule motor activity IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004180 carboxypeptidase activity IEP Neighborhood
MF GO:0004185 serine-type carboxypeptidase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006928 movement of cell or subcellular component IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007018 microtubule-based movement IEP Neighborhood
MF GO:0008017 microtubule binding IEP Neighborhood
MF GO:0008238 exopeptidase activity IEP Neighborhood
MF GO:0015631 tubulin binding IEP Neighborhood
MF GO:0016409 palmitoyltransferase activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
MF GO:0070008 serine-type exopeptidase activity IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!