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  5. Zm00001e012729_P001

Zm00001e012729_P001


Description : E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana (sp|q9lta6|wav3_arath : 165.0)


Gene families : OG0000379 (Archaeplastida) Phylogenetic Tree(s): OG0000379_tree ,
OG_05_0000514 (LandPlants) Phylogenetic Tree(s): OG_05_0000514_tree ,
OG_06_0014042 (SeedPlants) Phylogenetic Tree(s): OG_06_0014042_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012729_P001
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00033p00020480 evm_27.TU.AmTr_v1... E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G08050 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Archaeplastida
AT3G54780 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Archaeplastida
AT4G37890 EDA40 Zinc finger (C3HC4-type RING finger) family protein 0.02 Archaeplastida
AT5G49665 No alias Zinc finger (C3HC4-type RING finger) family protein 0.03 Archaeplastida
Gb_01603 No alias ubiquitin protein ligase (WAV3) 0.05 Archaeplastida
LOC_Os04g01160.1 No alias ubiquitin protein ligase (WAV3) 0.03 Archaeplastida
LOC_Os08g03270.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os10g32740.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_218345g0010 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Smo141910 No alias No description available 0.02 Archaeplastida
Solyc05g056140.4.1 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e004621_P001 No alias E3 ubiquitin-protein ligase WAV3 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0009678 hydrogen-translocating pyrophosphatase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 83 112
IPR032838 Vwaint_dom 582 654
IPR002035 VWF_A 238 417
No external refs found!