Zm00001e012811_P003

Description : Flowering locus K homology domain OS=Arabidopsis thaliana (sp|q9sr13|flk_arath : 186.0)

Gene families : OG0021580 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0021421 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0020701 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Zm00001e012811_P003
Cluster	HCCA: Cluster_309

Target	Alias	Description	ECC score	Gene Family Method	Actions
LOC_Os10g27470.1	No alias	Flowering locus K homology domain OS=Arabidopsis...	0.07	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001522	pseudouridine synthesis	IEP	Neighborhood
MF	GO:0003743	translation initiation factor activity	IEP	Neighborhood
MF	GO:0005515	protein binding	IEP	Neighborhood
BP	GO:0006139	nucleobase-containing compound metabolic process	IEP	Neighborhood
BP	GO:0006334	nucleosome assembly	IEP	Neighborhood
BP	GO:0006397	mRNA processing	IEP	Neighborhood
MF	GO:0008536	Ran GTPase binding	IEP	Neighborhood
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Neighborhood
BP	GO:0009451	RNA modification	IEP	Neighborhood
MF	GO:0009982	pseudouridine synthase activity	IEP	Neighborhood
MF	GO:0016866	intramolecular transferase activity	IEP	Neighborhood
MF	GO:0017016	Ras GTPase binding	IEP	Neighborhood
MF	GO:0031267	small GTPase binding	IEP	Neighborhood
BP	GO:0034728	nucleosome organization	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood
MF	GO:0051020	GTPase binding	IEP	Neighborhood
BP	GO:0065004	protein-DNA complex assembly	IEP	Neighborhood
BP	GO:0071824	protein-DNA complex subunit organization	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR004088	KH_dom_type_1	57	108
IPR004088	KH_dom_type_1	144	210

External Links

No external refs found!

Zm00001e012811_P003

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation