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Zm00001e012830_P001


Description : F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana (sp|q8l736|ski11_arath : 441.0)


Gene families : OG0000977 (Archaeplastida) Phylogenetic Tree(s): OG0000977_tree ,
OG_05_0000627 (LandPlants) Phylogenetic Tree(s): OG_05_0000627_tree ,
OG_06_0014106 (SeedPlants) Phylogenetic Tree(s): OG_06_0014106_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012830_P001
Cluster HCCA: Cluster_316

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00255050 evm_27.TU.AmTr_v1... F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.05 Archaeplastida
AT1G14330 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
AT2G02870 No alias Galactose oxidase/kelch repeat superfamily protein 0.06 Archaeplastida
GSVIVT01008033001 No alias F-box/kelch-repeat protein At1g74510 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01020023001 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_41312 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g51350.1 No alias F-box/kelch-repeat protein At1g74510 OS=Arabidopsis... 0.03 Archaeplastida
MA_122694g0010 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.04 Archaeplastida
Smo79476 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis thaliana 0.03 Archaeplastida
Solyc04g005670.3.1 No alias F-box/kelch-repeat protein SKIP11 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g069320.1.1 No alias F-box/kelch-repeat protein At5g60570 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e023895_P005 No alias F-box/kelch-repeat protein At1g74510 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0003924 GTPase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP Neighborhood
MF GO:0015020 glucuronosyltransferase activity IEP Neighborhood
MF GO:0016462 pyrophosphatase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Neighborhood
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0017111 nucleoside-triphosphatase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0040008 regulation of growth IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0045927 positive regulation of growth IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006652 Kelch_1 282 328
IPR006652 Kelch_1 234 280
No external refs found!