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  5. Zm00001e012856_P001

Zm00001e012856_P001


Description : transcription factor (TIFY)


Gene families : OG0000437 (Archaeplastida) Phylogenetic Tree(s): OG0000437_tree ,
OG_05_0000221 (LandPlants) Phylogenetic Tree(s): OG_05_0000221_tree ,
OG_06_0000753 (SeedPlants) Phylogenetic Tree(s): OG_06_0000753_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012856_P001
Cluster HCCA: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00130370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TIFY... 0.05 Archaeplastida
AMTR_s00131p00119200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.TIFY... 0.09 Archaeplastida
AT1G17380 TIFY11A, JAZ5 jasmonate-zim-domain protein 5 0.08 Archaeplastida
AT1G19180 TIFY10A, JAZ1 jasmonate-zim-domain protein 1 0.03 Archaeplastida
AT1G70700 JAZ9, TIFY7 TIFY domain/Divergent CCT motif family protein 0.05 Archaeplastida
AT1G74950 TIFY10B, JAZ2 TIFY domain/Divergent CCT motif family protein 0.06 Archaeplastida
AT5G13220 JAS1, JAZ10, TIFY9 jasmonate-zim-domain protein 10 0.04 Archaeplastida
GSVIVT01015042001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.09 Archaeplastida
GSVIVT01016721001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.04 Archaeplastida
GSVIVT01023256001 No alias RNA biosynthesis.transcriptional activation.TIFY... 0.03 Archaeplastida
Gb_19069 No alias transcription factor (TIFY) 0.06 Archaeplastida
LOC_Os03g08320.1 No alias transcription factor (TIFY) 0.1 Archaeplastida
LOC_Os03g08330.1 No alias transcription factor (TIFY) 0.16 Archaeplastida
LOC_Os03g27900.1 No alias transcription factor (TIFY) 0.03 Archaeplastida
LOC_Os03g28940.1 No alias component JAZ of jasmonic acid receptor complex.... 0.04 Archaeplastida
LOC_Os07g42370.1 No alias component JAZ of jasmonic acid receptor complex.... 0.07 Archaeplastida
LOC_Os09g26780.1 No alias transcription factor (TIFY) 0.09 Archaeplastida
LOC_Os10g25290.1 No alias transcription factor (TIFY) 0.07 Archaeplastida
MA_10229741g0010 No alias transcription factor (TIFY) 0.08 Archaeplastida
MA_10426545g0010 No alias transcription factor (TIFY) 0.02 Archaeplastida
MA_10426545g0020 No alias transcription factor (TIFY) 0.03 Archaeplastida
MA_10430801g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_1854g0020 No alias transcription factor (TIFY) 0.04 Archaeplastida
MA_469601g0010 No alias transcription factor (TIFY) 0.04 Archaeplastida
MA_68496g0010 No alias transcription factor (TIFY) 0.04 Archaeplastida
MA_8355655g0010 No alias transcription factor (TIFY) 0.03 Archaeplastida
MA_8757791g0010 No alias transcription factor (TIFY) 0.04 Archaeplastida
Mp6g06230.1 No alias transcription factor (TIFY) 0.07 Archaeplastida
Pp3c16_13490V3.1 No alias TIFY domain/Divergent CCT motif family protein 0.05 Archaeplastida
Pp3c25_6300V3.1 No alias jasmonate-zim-domain protein 4 0.04 Archaeplastida
Pp3c25_6330V3.1 No alias jasmonate-zim-domain protein 3 0.03 Archaeplastida
Pp3c5_11730V3.1 No alias TIFY domain/Divergent CCT motif family protein 0.03 Archaeplastida
Solyc03g122190.3.1 No alias transcription factor (TIFY) 0.09 Archaeplastida
Solyc06g068930.2.1 No alias transcription factor (TIFY) 0.03 Archaeplastida
Solyc07g042170.3.1 No alias component JAZ of jasmonic acid receptor complex.... 0.07 Archaeplastida
Solyc12g009220.2.1 No alias component JAZ of jasmonic acid receptor complex.... 0.1 Archaeplastida
Solyc12g049400.2.1 No alias component JAZ of jasmonic acid receptor complex.... 0.05 Archaeplastida
Zm00001e001934_P001 No alias component JAZ of jasmonic acid receptor complex.... 0.03 Archaeplastida
Zm00001e012855_P001 No alias transcription factor (TIFY) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0042910 xenobiotic transmembrane transporter activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018467 CCT_CS 118 143
IPR010399 Tify_dom 67 99
No external refs found!