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  5. Zm00001e012916_P001

Zm00001e012916_P001


Description : Probable E3 ubiquitin-protein ligase RHB1A OS=Arabidopsis thaliana (sp|q2hij8|rhb1a_arath : 108.0)


Gene families : OG0000951 (Archaeplastida) Phylogenetic Tree(s): OG0000951_tree ,
OG_05_0000709 (LandPlants) Phylogenetic Tree(s): OG_05_0000709_tree ,
OG_06_0000552 (SeedPlants) Phylogenetic Tree(s): OG_06_0000552_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e012916_P001
Cluster HCCA: Cluster_153

Target Alias Description ECC score Gene Family Method Actions
AT4G23450 AtAIRP1, AIRP1 RING/U-box superfamily protein 0.03 Archaeplastida
AT5G38895 No alias RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01001107001 No alias E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01027002001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01036545001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
LOC_Os11g18947.1 No alias Probable E3 ubiquitin-protein ligase RHB1A... 0.04 Archaeplastida
LOC_Os11g41140.1 No alias E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis... 0.02 Archaeplastida
Mp6g04810.1 No alias E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis... 0.03 Archaeplastida
Solyc02g089240.3.1 No alias E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis... 0.06 Archaeplastida
Solyc08g081300.4.1 No alias Probable E3 ubiquitin-protein ligase RHB1A... 0.04 Archaeplastida
Zm00001e018778_P002 No alias E3 ubiquitin-protein ligase At3g02290 OS=Arabidopsis... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006643 membrane lipid metabolic process IEP Neighborhood
BP GO:0006665 sphingolipid metabolic process IEP Neighborhood
BP GO:0006672 ceramide metabolic process IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
MF GO:0008199 ferric iron binding IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Neighborhood
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
InterPro domains Description Start Stop
IPR024766 Znf_RING_H2 119 165
No external refs found!