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Description : Uncharacterized zinc finger CCHC domain-containing protein At4g19190 OS=Arabidopsis thaliana (sp|q8vz67|y4919_arath : 336.0)
Gene families : OG0006780 (Archaeplastida) Phylogenetic Tree(s): OG0006780_tree ,
OG_05_0008539 (LandPlants) Phylogenetic Tree(s): OG_05_0008539_tree ,
OG_06_0010703 (SeedPlants) Phylogenetic Tree(s): OG_06_0010703_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Zm00001e013226_P001 | |
| Cluster | HCCA: Cluster_322 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT4G19190 | No alias | zinc knuckle (CCHC-type) family protein | 0.07 | Archaeplastida | |
| LOC_Os06g49510.1 | No alias | Uncharacterized zinc finger CCHC domain-containing... | 0.09 | Archaeplastida | |
| Mp5g20100.1 | No alias | Uncharacterized zinc finger CCHC domain-containing... | 0.07 | Archaeplastida | |
| Smo416934 | No alias | Uncharacterized zinc finger CCHC domain-containing... | 0.02 | Archaeplastida | |
| Solyc08g075420.4.1 | No alias | Uncharacterized zinc finger CCHC domain-containing... | 0.02 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | Neighborhood |
| MF | GO:0003676 | nucleic acid binding | IEP | Neighborhood |
| MF | GO:0004386 | helicase activity | IEP | Neighborhood |
| MF | GO:0005488 | binding | IEP | Neighborhood |
| MF | GO:0005515 | protein binding | IEP | Neighborhood |
| MF | GO:0005524 | ATP binding | IEP | Neighborhood |
| MF | GO:0005543 | phospholipid binding | IEP | Neighborhood |
| CC | GO:0005694 | chromosome | IEP | Neighborhood |
| BP | GO:0006325 | chromatin organization | IEP | Neighborhood |
| BP | GO:0006354 | DNA-templated transcription, elongation | IEP | Neighborhood |
| BP | GO:0006368 | transcription elongation from RNA polymerase II promoter | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006476 | protein deacetylation | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| CC | GO:0008023 | transcription elongation factor complex | IEP | Neighborhood |
| MF | GO:0008144 | drug binding | IEP | Neighborhood |
| MF | GO:0008237 | metallopeptidase activity | IEP | Neighborhood |
| BP | GO:0016043 | cellular component organization | IEP | Neighborhood |
| BP | GO:0016569 | covalent chromatin modification | IEP | Neighborhood |
| BP | GO:0016570 | histone modification | IEP | Neighborhood |
| BP | GO:0016575 | histone deacetylation | IEP | Neighborhood |
| CC | GO:0016593 | Cdc73/Paf1 complex | IEP | Neighborhood |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | Neighborhood |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | Neighborhood |
| MF | GO:0035091 | phosphatidylinositol binding | IEP | Neighborhood |
| BP | GO:0035601 | protein deacylation | IEP | Neighborhood |
| MF | GO:0043167 | ion binding | IEP | Neighborhood |
| MF | GO:0043168 | anion binding | IEP | Neighborhood |
| BP | GO:0051276 | chromosome organization | IEP | Neighborhood |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Neighborhood |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Neighborhood |
| BP | GO:0098732 | macromolecule deacylation | IEP | Neighborhood |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR019339 | CIR_N_dom | 41 | 76 |
| No external refs found! |