Zm00001e013256_P002


Description : transcription factor (SRS)


Gene families : OG0001199 (Archaeplastida) Phylogenetic Tree(s): OG0001199_tree ,
OG_05_0000755 (LandPlants) Phylogenetic Tree(s): OG_05_0000755_tree ,
OG_06_0000578 (SeedPlants) Phylogenetic Tree(s): OG_06_0000578_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013256_P002
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00223800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SRS... 0.02 Archaeplastida
AMTR_s00063p00161200 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SRS... 0.03 Archaeplastida
AT1G19790 SRS7 SHI-related sequence 7 0.03 Archaeplastida
AT1G75520 SRS5 SHI-related sequence 5 0.03 Archaeplastida
AT3G51060 SRS1, STY1 Lateral root primordium (LRP) protein-related 0.03 Archaeplastida
AT4G36260 SRS2, STY2 Lateral root primordium (LRP) protein-related 0.03 Archaeplastida
AT5G12330 LRP1 Lateral root primordium (LRP) protein-related 0.05 Archaeplastida
AT5G66350 SHI Lateral root primordium (LRP) protein-related 0.05 Archaeplastida
GSVIVT01009812001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.07 Archaeplastida
GSVIVT01018845001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.03 Archaeplastida
GSVIVT01024206001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.03 Archaeplastida
GSVIVT01037267001 No alias RNA biosynthesis.transcriptional activation.SRS... 0.02 Archaeplastida
LOC_Os01g72490.1 No alias transcription factor (SRS) 0.03 Archaeplastida
LOC_Os05g32070.1 No alias transcription factor (SRS) 0.04 Archaeplastida
LOC_Os06g49830.1 No alias transcription factor (SRS) 0.05 Archaeplastida
LOC_Os08g43410.1 No alias transcription factor (SRS) 0.05 Archaeplastida
LOC_Os09g36160.1 No alias transcription factor (SRS) 0.06 Archaeplastida
MA_2299g0010 No alias transcription factor (SRS) 0.03 Archaeplastida
Mp3g19510.1 No alias transcription factor (SRS) 0.05 Archaeplastida
Pp3c18_8920V3.1 No alias Lateral root primordium (LRP) protein-related 0.02 Archaeplastida
Solyc02g084680.3.1 No alias transcription factor (SRS) 0.02 Archaeplastida
Solyc04g080970.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g064800.3.1 No alias transcription factor (SRS) 0.04 Archaeplastida
Zm00001e004006_P001 No alias transcription factor (SRS) 0.03 Archaeplastida
Zm00001e024681_P001 No alias transcription factor (SRS) 0.03 Archaeplastida
Zm00001e026854_P001 No alias transcription factor (SRS) 0.05 Archaeplastida
Zm00001e028304_P001 No alias transcription factor (SRS) 0.05 Archaeplastida
Zm00001e031567_P001 No alias transcription factor (SRS) 0.04 Archaeplastida
Zm00001e034798_P001 No alias transcription factor (SRS) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!