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  5. AT3G18560

AT3G18560


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001648 (Archaeplastida) Phylogenetic Tree(s): OG0001648_tree ,
OG_05_0001064 (LandPlants) Phylogenetic Tree(s): OG_05_0001064_tree ,
OG_06_0000804 (SeedPlants) Phylogenetic Tree(s): OG_06_0000804_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18560
Cluster HCCA: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00147p00067470 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
GSVIVT01030864001 No alias No description available 0.04 Archaeplastida
LOC_Os02g48150.1 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_115855g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_194872g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_68883g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Pp3c24_20410V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c24_20430V3.1 No alias No annotation 0.03 Archaeplastida
Zm00001e015624_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027966_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e031031_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IEP Neighborhood
MF GO:0001067 regulatory region nucleic acid binding IEP Neighborhood
MF GO:0004165 dodecenoyl-CoA delta-isomerase activity IEP Neighborhood
MF GO:0004364 glutathione transferase activity IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
MF GO:0008809 carnitine racemase activity IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009816 defense response to bacterium, incompatible interaction IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
BP GO:0010200 response to chitin IEP Neighborhood
BP GO:0010243 response to organonitrogen compound IEP Neighborhood
BP GO:0010260 animal organ senescence IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015804 neutral amino acid transport IEP Neighborhood
BP GO:0015824 proline transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016854 racemase and epimerase activity IEP Neighborhood
MF GO:0016856 racemase and epimerase activity, acting on hydroxy acids and derivatives IEP Neighborhood
MF GO:0016860 intramolecular oxidoreductase activity IEP Neighborhood
MF GO:0016863 intramolecular oxidoreductase activity, transposing C=C bonds IEP Neighborhood
MF GO:0035091 phosphatidylinositol binding IEP Neighborhood
BP GO:0042493 response to drug IEP Neighborhood
BP GO:0042537 benzene-containing compound metabolic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0044212 transcription regulatory region DNA binding IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046482 para-aminobenzoic acid metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:1901698 response to nitrogen compound IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!