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  5. Zm00001e013321_P002

Zm00001e013321_P002


Description : starch branching enzyme


Gene families : OG0001006 (Archaeplastida) Phylogenetic Tree(s): OG0001006_tree ,
OG_05_0002115 (LandPlants) Phylogenetic Tree(s): OG_05_0002115_tree ,
OG_06_0011285 (SeedPlants) Phylogenetic Tree(s): OG_06_0011285_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013321_P002
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00188540 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AT2G36390 SBE2.1, BE3 starch branching enzyme 2.1 0.04 Archaeplastida
AT5G03650 SBE2.2 starch branching enzyme 2.2 0.03 Archaeplastida
Cre10.g444700 No alias Carbohydrate metabolism.starch... 0.05 Archaeplastida
GSVIVT01008673001 No alias Carbohydrate metabolism.starch... 0.03 Archaeplastida
GSVIVT01033801001 No alias Carbohydrate metabolism.starch... 0.06 Archaeplastida
Gb_33676 No alias starch branching enzyme 0.04 Archaeplastida
LOC_Os02g32660.1 No alias starch branching enzyme 0.04 Archaeplastida
LOC_Os06g51084.1 No alias starch branching enzyme 0.04 Archaeplastida
MA_10431704g0010 No alias 1,4-alpha-glucan-branching enzyme 2-2,... 0.04 Archaeplastida
MA_15024g0020 No alias 1,4-alpha-glucan-branching enzyme 1,... 0.06 Archaeplastida
Mp7g15230.1 No alias starch branching enzyme 0.05 Archaeplastida
Pp3c27_2570V3.1 No alias starch branching enzyme 2.1 0.03 Archaeplastida
Solyc04g082400.3.1 No alias starch branching enzyme 0.03 Archaeplastida
Solyc09g009190.4.1 No alias starch branching enzyme 0.04 Archaeplastida
Zm00001e008234_P001 No alias starch branching enzyme 0.05 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0043169 cation binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004819 glutamine-tRNA ligase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006425 glutaminyl-tRNA aminoacylation IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
BP GO:0008652 cellular amino acid biosynthetic process IEP Neighborhood
BP GO:0009058 biosynthetic process IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
MF GO:0030976 thiamine pyrophosphate binding IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:1901681 sulfur compound binding IEP Neighborhood
MF GO:2001070 starch binding IEP Neighborhood
InterPro domains Description Start Stop
IPR006047 Glyco_hydro_13_cat_dom 299 368
IPR004193 Glyco_hydro_13_N 129 208
IPR006048 A-amylase/branching_C 663 763
No external refs found!