Zm00001e013404_P001


Description : Sar1-GTPase-regulating protein (Sec16)


Gene families : OG0000907 (Archaeplastida) Phylogenetic Tree(s): OG0000907_tree ,
OG_05_0000738 (LandPlants) Phylogenetic Tree(s): OG_05_0000738_tree ,
OG_06_0003044 (SeedPlants) Phylogenetic Tree(s): OG_06_0003044_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013404_P001
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00148170 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
AT5G47480 No alias RGPR-related 0.08 Archaeplastida
GSVIVT01004707001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Gb_04674 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 Archaeplastida
LOC_Os02g01490.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.05 Archaeplastida
LOC_Os06g01650.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.04 Archaeplastida
MA_10427360g0010 No alias Sar1-GTPase-regulating protein (Sec16) 0.06 Archaeplastida
MA_10427360g0020 No alias Sar1-GTPase-regulating protein (Sec16) 0.06 Archaeplastida
Mp1g19530.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.06 Archaeplastida
Pp3c12_25260V3.1 No alias RGPR-related 0.03 Archaeplastida
Smo441538 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Smo442780 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.05 Archaeplastida
Smo446951 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 Archaeplastida
Solyc08g007340.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.06 Archaeplastida
Solyc08g007360.3.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006354 DNA-templated transcription, elongation IEP Neighborhood
BP GO:0006368 transcription elongation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006886 intracellular protein transport IEP Neighborhood
CC GO:0008023 transcription elongation factor complex IEP Neighborhood
BP GO:0008104 protein localization IEP Neighborhood
BP GO:0015031 protein transport IEP Neighborhood
BP GO:0015833 peptide transport IEP Neighborhood
BP GO:0016192 vesicle-mediated transport IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
CC GO:0016593 Cdc73/Paf1 complex IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030126 COPI vesicle coat IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0033036 macromolecule localization IEP Neighborhood
BP GO:0042886 amide transport IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0045184 establishment of protein localization IEP Neighborhood
BP GO:0046907 intracellular transport IEP Neighborhood
BP GO:0051641 cellular localization IEP Neighborhood
BP GO:0051649 establishment of localization in cell IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR024298 ACE1_Sec16_Sec31 797 1077
IPR024340 Sec16_CCD 611 735
No external refs found!