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  5. Zm00001e013758_P003

Zm00001e013758_P003


Description : G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013758_P003
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00190540 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00048p00192390 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00059p00206130 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00094p00028710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00106p00040830 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00131p00063460 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AT1G32240 KAN2 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT1G69580 No alias Homeodomain-like superfamily protein 0.1 Archaeplastida
AT1G79430 APL, WDY Homeodomain-like superfamily protein 0.06 Archaeplastida
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
AT2G40260 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
AT3G04030 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT3G12730 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
AT4G04605 No alias No description available 0.05 Archaeplastida
AT4G13640 UNE16 Homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G06800 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
AT5G18240 ATMYR1, MYR1 myb-related protein 1 0.03 Archaeplastida
AT5G45580 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
GSVIVT01000606001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01007064001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01007065001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01009589001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01013085001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01021225001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
GSVIVT01022645001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
GSVIVT01033381001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
GSVIVT01036717001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
Gb_05469 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_17437 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Gb_17966 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os02g04640.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os02g07770.1 No alias G2-like GARP transcription factor 0.08 Archaeplastida
LOC_Os03g20900.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os03g21240.1 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
LOC_Os04g56990.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
LOC_Os06g45410.1 No alias G2-like GARP transcription factor 0.06 Archaeplastida
LOC_Os08g06370.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
LOC_Os08g33050.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os08g33750.1 No alias G2-like GARP transcription factor 0.1 Archaeplastida
LOC_Os09g12770.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_10432937g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_138039g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_15920g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_181986g0010 No alias G2-like GARP transcription factor 0.04 Archaeplastida
MA_201937g0020 No alias Myb-related protein 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_21538g0020 No alias G2-like GARP transcription factor 0.02 Archaeplastida
MA_28188g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_8183372g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_937875g0010 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Mp3g04970.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Mp4g08700.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Pp3c10_13030V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c13_9170V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c1_41530V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c20_7050V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c21_2850V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c22_8210V3.1 No alias Homeodomain-like superfamily protein 0.01 Archaeplastida
Pp3c22_8217V3.1 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
Pp3c23_19680V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c26_3290V3.1 No alias myb-like HTH transcriptional regulator family protein 0.04 Archaeplastida
Pp3c3_23200V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_34700V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c3_34900V3.1 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Pp3c8_8720V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Smo405704 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Solyc02g076670.3.1 No alias Putative Myb family transcription factor At1g14600... 0.05 Archaeplastida
Solyc02g080730.2.1 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Solyc04g008480.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc05g007890.4.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g066180.4.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc10g078720.2.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Solyc10g083340.3.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Solyc10g085620.2.1 No alias G2-like GARP transcription factor 0.05 Archaeplastida
Solyc12g017370.3.1 No alias G2-like GARP transcription factor 0.08 Archaeplastida
Zm00001e003093_P001 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Zm00001e007231_P002 No alias Putative Myb family transcription factor At1g14600... 0.02 Archaeplastida
Zm00001e009294_P001 No alias Putative Myb family transcription factor At1g14600... 0.03 Archaeplastida
Zm00001e015514_P001 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e039024_P001 No alias G2-like GARP transcription factor 0.01 Archaeplastida
Zm00001e040203_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e041868_P002 No alias G2-like GARP transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004834 tryptophan synthase activity IEP Neighborhood
MF GO:0005384 manganese ion transmembrane transporter activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006568 tryptophan metabolic process IEP Neighborhood
BP GO:0006586 indolalkylamine metabolic process IEP Neighborhood
BP GO:0006873 cellular ion homeostasis IEP Neighborhood
BP GO:0006875 cellular metal ion homeostasis IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0030003 cellular cation homeostasis IEP Neighborhood
BP GO:0030026 cellular manganese ion homeostasis IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0042430 indole-containing compound metabolic process IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0046916 cellular transition metal ion homeostasis IEP Neighborhood
BP GO:0048878 chemical homeostasis IEP Neighborhood
BP GO:0050801 ion homeostasis IEP Neighborhood
BP GO:0055065 metal ion homeostasis IEP Neighborhood
BP GO:0055071 manganese ion homeostasis IEP Neighborhood
BP GO:0055076 transition metal ion homeostasis IEP Neighborhood
BP GO:0055080 cation homeostasis IEP Neighborhood
BP GO:0055082 cellular chemical homeostasis IEP Neighborhood
BP GO:0098771 inorganic ion homeostasis IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 48 96
IPR025756 Myb_CC_LHEQLE 142 188
No external refs found!