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  5. Zm00001e013821_P001

Zm00001e013821_P001


Description : multifunctional scaffold component ATG11 of ATG1-13 autophagosome assembly control complex


Gene families : OG0005689 (Archaeplastida) Phylogenetic Tree(s): OG0005689_tree ,
OG_05_0006599 (LandPlants) Phylogenetic Tree(s): OG_05_0006599_tree ,
OG_06_0007586 (SeedPlants) Phylogenetic Tree(s): OG_06_0007586_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013821_P001
Cluster HCCA: Cluster_314

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00064p00167250 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG1-13... 0.06 Archaeplastida
AT4G30790 No alias INVOLVED IN: autophagy; EXPRESSED IN: 24 plant... 0.04 Archaeplastida
LOC_Os02g08350.1 No alias multifunctional scaffold component ATG11 of ATG1-13... 0.04 Archaeplastida
MA_787g0010 No alias multifunctional scaffold component ATG11 of ATG1-13... 0.02 Archaeplastida
Mp4g18080.1 No alias multifunctional scaffold component ATG11 of ATG1-13... 0.03 Archaeplastida
Solyc07g005970.3.1 No alias multifunctional scaffold component ATG11 of ATG1-13... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033643 host cell part IEP Neighborhood
CC GO:0033646 host intracellular part IEP Neighborhood
CC GO:0033647 host intracellular organelle IEP Neighborhood
CC GO:0033648 host intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0042025 host cell nucleus IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
CC GO:0044217 other organism part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
MF GO:0070569 uridylyltransferase activity IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
InterPro domains Description Start Stop
IPR019460 Atg11_C 1015 1136
No external refs found!