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  5. Zm00001e013843_P002

Zm00001e013843_P002


Description : organellar chaperone (Clp-p|Clp-m)


Gene families : OG0000276 (Archaeplastida) Phylogenetic Tree(s): OG0000276_tree ,
OG_05_0002603 (LandPlants) Phylogenetic Tree(s): OG_05_0002603_tree ,
OG_06_0004579 (SeedPlants) Phylogenetic Tree(s): OG_06_0004579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e013843_P002
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AT1G74310 ATHSP101, HOT1, HSP101 heat shock protein 101 0.06 Archaeplastida
AT2G25140 CLPB4, CLPB-M, HSP98.7 casein lytic proteinase B4 0.05 Archaeplastida
Cpa|evm.model.tig00001416.8 No alias Chaperone protein ClpC2, chloroplastic OS=Arabidopsis thaliana 0.01 Archaeplastida
Cpa|evm.model.tig00021365.4 No alias Chaperone protein ClpB1 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01007880001 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
GSVIVT01011496001 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
GSVIVT01035900001 No alias External stimuli response.temperature.Hsp... 0.06 Archaeplastida
Gb_21271 No alias cytosolic chaperone (Hsp101) 0.04 Archaeplastida
LOC_Os02g08490.1 No alias organellar chaperone (Clp-p|Clp-m) 0.06 Archaeplastida
LOC_Os03g31300.1 No alias organellar chaperone (Clp-p|Clp-m) 0.04 Archaeplastida
LOC_Os05g44340.1 No alias cytosolic chaperone (Hsp101) 0.07 Archaeplastida
MA_21130g0010 No alias Chaperone protein ClpB1 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
Smo170696 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
Smo174539 No alias External stimuli response.temperature.Hsp... 0.05 Archaeplastida
Smo411118 No alias External stimuli response.temperature.Hsp... 0.04 Archaeplastida
Solyc02g088610.4.1 No alias organellar chaperone (Clp-p|Clp-m) 0.05 Archaeplastida
Solyc03g115230.3.1 No alias cytosolic chaperone (Hsp101) 0.07 Archaeplastida
Solyc03g118340.3.1 No alias chaperone component ClpC of chloroplast Clp-type protease complex 0.03 Archaeplastida
Solyc06g011380.2.1 No alias Chaperone protein ClpB4, mitochondrial OS=Arabidopsis... 0.06 Archaeplastida
Solyc06g011400.2.1 No alias Chaperone protein ClpB4, mitochondrial OS=Arabidopsis... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004176 Clp_N 193 244
IPR004176 Clp_N 116 167
IPR003959 ATPase_AAA_core 699 868
IPR019489 Clp_ATPase_C 875 954
IPR003959 ATPase_AAA_core 303 419
No external refs found!