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  5. Zm00001e014107_P001

Zm00001e014107_P001


Description : regulatory component RPT3 of 26S proteasome


Gene families : OG0002892 (Archaeplastida) Phylogenetic Tree(s): OG0002892_tree ,
OG_05_0002758 (LandPlants) Phylogenetic Tree(s): OG_05_0002758_tree ,
OG_06_0004068 (SeedPlants) Phylogenetic Tree(s): OG_06_0004068_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014107_P001
Cluster HCCA: Cluster_258

Target Alias Description ECC score Gene Family Method Actions
AT5G58290 RPT3 regulatory particle triple-A ATPase 3 0.03 Archaeplastida
Cpa|evm.model.tig00022075.46 No alias 26S proteasome regulatory subunit 6B homolog... 0.04 Archaeplastida
Cre09.g402450 No alias Protein degradation.26S proteasome.regulatory... 0.06 Archaeplastida
LOC_Os02g21970.1 No alias regulatory component RPT3 of 26S proteasome 0.05 Archaeplastida
Mp8g10830.1 No alias regulatory component RPT3 of 26S proteasome 0.06 Archaeplastida
Smo180600 No alias Protein degradation.26S proteasome.regulatory... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006487 protein N-linked glycosylation IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
CC GO:0008250 oligosaccharyltransferase complex IEP Neighborhood
BP GO:0008654 phospholipid biosynthetic process IEP Neighborhood
CC GO:0016592 mediator complex IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0019899 enzyme binding IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 258 391
IPR032501 Prot_ATP_ID_OB 145 200
No external refs found!