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  5. Zm00001e014153_P001

Zm00001e014153_P001


Description : no hits & (original description: none)


Gene families : OG0002447 (Archaeplastida) Phylogenetic Tree(s): OG0002447_tree ,
OG_05_0002022 (LandPlants) Phylogenetic Tree(s): OG_05_0002022_tree ,
OG_06_0001683 (SeedPlants) Phylogenetic Tree(s): OG_06_0001683_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014153_P001
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00155p00028780 evm_27.TU.AmTr_v1... Protein PAT1 homolog OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01015721001 No alias Protein PAT1 homolog 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
Gb_01548 No alias mRNA decay factor (PAT1) 0.02 Archaeplastida
Mp4g14040.1 No alias mRNA decay factor (PAT1) 0.05 Archaeplastida
Solyc05g016240.4.1 No alias mRNA decay factor (PAT1) 0.04 Archaeplastida
Solyc12g017260.2.1 No alias mRNA decay factor (PAT1) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005643 nuclear pore IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006913 nucleocytoplasmic transport IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
MF GO:0017056 structural constituent of nuclear pore IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051169 nuclear transport IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!