AT3G19430


Description : late embryogenesis abundant protein-related / LEA protein-related


Gene families : OG0000287 (Archaeplastida) Phylogenetic Tree(s): OG0000287_tree ,
OG_05_0000195 (LandPlants) Phylogenetic Tree(s): OG_05_0000195_tree ,
OG_06_0000511 (SeedPlants) Phylogenetic Tree(s): OG_06_0000511_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G19430
Cluster HCCA: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00178790 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
AMTR_s00003p00264210 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AMTR_s00040p00170390 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AMTR_s00171p00044550 evm_27.TU.AmTr_v1... No description available 0.04 Archaeplastida
Gb_38738 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g73710.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g73730.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os05g01680.1 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_61955g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_6494080g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_6640022g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_6771381g0010 No alias no hits & (original description: none) 0.09 Archaeplastida
MA_74876g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
MA_7605738g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_8955g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
MA_957739g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp1g03490.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp7g08760.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mpzg00310.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Pp3c20_18650V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.03 Archaeplastida
Pp3s49_30V3.1 No alias Late embryogenesis abundant (LEA) protein-related 0.03 Archaeplastida
Solyc01g107710.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc01g107720.3.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc02g078930.3.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g034130.2.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc08g066590.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g069280.2.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc11g073140.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc11g073150.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Zm00001e002062_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e018525_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e018526_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e018527_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e021386_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e024129_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e028269_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e029686_P001 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source
MF GO:0003954 NADH dehydrogenase activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0005199 structural constituent of cell wall IEP Neighborhood
CC GO:0005576 extracellular region IEP Neighborhood
BP GO:0006120 mitochondrial electron transport, NADH to ubiquinone IEP Neighborhood
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Neighborhood
MF GO:0008446 GDP-mannose 4,6-dehydratase activity IEP Neighborhood
BP GO:0009225 nucleotide-sugar metabolic process IEP Neighborhood
CC GO:0009505 plant-type cell wall IEP Neighborhood
BP GO:0009834 plant-type secondary cell wall biogenesis IEP Neighborhood
MF GO:0009927 histidine phosphotransfer kinase activity IEP Neighborhood
BP GO:0010053 root epidermal cell differentiation IEP Neighborhood
BP GO:0010054 trichoblast differentiation IEP Neighborhood
MF GO:0010427 abscisic acid binding IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0019840 isoprenoid binding IEP Neighborhood
BP GO:0022904 respiratory electron transport chain IEP Neighborhood
BP GO:0030154 cell differentiation IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
MF GO:0033293 monocarboxylic acid binding IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
MF GO:0043178 alcohol binding IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0048767 root hair elongation IEP Neighborhood
BP GO:0048829 root cap development IEP Neighborhood
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Neighborhood
BP GO:0090627 plant epidermal cell differentiation IEP Neighborhood
InterPro domains Description Start Stop
IPR009646 Root_cap 470 526
No external refs found!