AT3G19450 (ATCAD4, CAD-C, CAD, CAD4)

Aliases : ATCAD4, CAD-C, CAD, CAD4

Description : GroES-like zinc-binding alcohol dehydrogenase family protein

Gene families : OG0000219 (Archaeplastida) Phylogenetic Tree(s): OG0000219_tree ,
OG_05_0006034 (LandPlants) Phylogenetic Tree(s): OG_05_0006034_tree ,
OG_06_0005254 (SeedPlants) Phylogenetic Tree(s): OG_06_0005254_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G19450
Cluster	HCCA: Cluster_174

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01002106001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
GSVIVT01006459001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.05	Archaeplastida
GSVIVT01013448001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.04	Archaeplastida
GSVIVT01026631001	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Gb_34699	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
LOC_Os09g23530.1	No alias	Probable cinnamyl alcohol dehydrogenase 8A OS=Oryza...	0.04	Archaeplastida
Mp5g14700.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.02	Archaeplastida
Smo444096	No alias	Cell wall.lignin.monolignol synthesis.cinnamyl-alcohol...	0.04	Archaeplastida
Solyc08g014360.2.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Solyc11g010990.3.1	No alias	Enzyme classification.EC_1 oxidoreductases.EC_1.1...	0.03	Archaeplastida
Zm00001e006880_P001	No alias	Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza...	0.03	Archaeplastida
Zm00001e013914_P002	No alias	cinnamyl-alcohol dehydrogenase	0.03	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009698	phenylpropanoid metabolic process	None	Extended
BP	GO:0009699	phenylpropanoid biosynthetic process	None	Extended
BP	GO:0009808	lignin metabolic process	None	Extended
BP	GO:0009809	lignin biosynthetic process	IGI	Interproscan
BP	GO:0009809	lignin biosynthetic process	TAS	Interproscan
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	None	Extended
MF	GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IDA	Interproscan
MF	GO:0045551	cinnamyl-alcohol dehydrogenase activity	IMP	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080167	response to karrikin	IEP	Interproscan
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
BP	GO:0002238	response to molecule of fungal origin	IEP	Neighborhood
MF	GO:0003690	double-stranded DNA binding	IEP	Neighborhood
MF	GO:0004568	chitinase activity	IEP	Neighborhood
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IEP	Neighborhood
CC	GO:0005789	endoplasmic reticulum membrane	IEP	Neighborhood
BP	GO:0006405	RNA export from nucleus	IEP	Neighborhood
BP	GO:0006406	mRNA export from nucleus	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
MF	GO:0008172	S-methyltransferase activity	IEP	Neighborhood
MF	GO:0008417	fucosyltransferase activity	IEP	Neighborhood
BP	GO:0010017	red or far-red light signaling pathway	IEP	Neighborhood
BP	GO:0010033	response to organic substance	IEP	Neighborhood
BP	GO:0010053	root epidermal cell differentiation	IEP	Neighborhood
BP	GO:0010054	trichoblast differentiation	IEP	Neighborhood
BP	GO:0010074	maintenance of meristem identity	IEP	Neighborhood
BP	GO:0010099	regulation of photomorphogenesis	IEP	Neighborhood
BP	GO:0010167	response to nitrate	IEP	Neighborhood
BP	GO:0010274	hydrotropism	IEP	Neighborhood
BP	GO:0010440	stomatal lineage progression	IEP	Neighborhood
BP	GO:0015698	inorganic anion transport	IEP	Neighborhood
BP	GO:0015706	nitrate transport	IEP	Neighborhood
BP	GO:0016049	cell growth	IEP	Neighborhood
BP	GO:0016145	S-glycoside catabolic process	IEP	Neighborhood
MF	GO:0016740	transferase activity	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Neighborhood
MF	GO:0018708	thiol S-methyltransferase activity	IEP	Neighborhood
BP	GO:0019722	calcium-mediated signaling	IEP	Neighborhood
BP	GO:0019759	glycosinolate catabolic process	IEP	Neighborhood
BP	GO:0019762	glucosinolate catabolic process	IEP	Neighborhood
BP	GO:0019827	stem cell population maintenance	IEP	Neighborhood
BP	GO:0019932	second-messenger-mediated signaling	IEP	Neighborhood
BP	GO:0021700	developmental maturation	IEP	Neighborhood
BP	GO:0030154	cell differentiation	IEP	Neighborhood
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	Neighborhood
BP	GO:0031539	positive regulation of anthocyanin metabolic process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
CC	GO:0032541	cortical endoplasmic reticulum	IEP	Neighborhood
BP	GO:0040007	growth	IEP	Neighborhood
BP	GO:0042221	response to chemical	IEP	Neighborhood
BP	GO:0042752	regulation of circadian rhythm	IEP	Neighborhood
BP	GO:0042753	positive regulation of circadian rhythm	IEP	Neighborhood
BP	GO:0044273	sulfur compound catabolic process	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
BP	GO:0048469	cell maturation	IEP	Neighborhood
BP	GO:0048588	developmental cell growth	IEP	Neighborhood
BP	GO:0048764	trichoblast maturation	IEP	Neighborhood
BP	GO:0048765	root hair cell differentiation	IEP	Neighborhood
BP	GO:0048767	root hair elongation	IEP	Neighborhood
BP	GO:0048869	cellular developmental process	IEP	Neighborhood
MF	GO:0050284	sinapate 1-glucosyltransferase activity	IEP	Neighborhood
BP	GO:0050657	nucleic acid transport	IEP	Neighborhood
BP	GO:0050658	RNA transport	IEP	Neighborhood
BP	GO:0051028	mRNA transport	IEP	Neighborhood
BP	GO:0051236	establishment of RNA localization	IEP	Neighborhood
BP	GO:0071489	cellular response to red or far red light	IEP	Neighborhood
BP	GO:0071695	anatomical structure maturation	IEP	Neighborhood
CC	GO:0071782	endoplasmic reticulum tubular network	IEP	Neighborhood
BP	GO:0090627	plant epidermal cell differentiation	IEP	Neighborhood
MF	GO:0097472	cyclin-dependent protein kinase activity	IEP	Neighborhood
BP	GO:0098727	maintenance of cell number	IEP	Neighborhood
CC	GO:0098827	endoplasmic reticulum subcompartment	IEP	Neighborhood
BP	GO:1901136	carbohydrate derivative catabolic process	IEP	Neighborhood
BP	GO:1901658	glycosyl compound catabolic process	IEP	Neighborhood
BP	GO:2000030	regulation of response to red or far red light	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013149	ADH_C	192	314
IPR013154	ADH_N	36	150

External Links

No external refs found!

AT3G19450 (ATCAD4, CAD-C, CAD, CAD4)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation