Zm00001e014590_P001


Description : mRNA endoribonuclease (G3BP)


Gene families : OG0000605 (Archaeplastida) Phylogenetic Tree(s): OG0000605_tree ,
OG_05_0001455 (LandPlants) Phylogenetic Tree(s): OG_05_0001455_tree ,
OG_06_0001520 (SeedPlants) Phylogenetic Tree(s): OG_06_0001520_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Zm00001e014590_P001
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00228400 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G13730 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.03 Archaeplastida
Cpa|evm.model.tig00000829.14 No alias No description available 0.04 Archaeplastida
Cre02.g092400 No alias No description available 0.03 Archaeplastida
LOC_Os02g03890.1 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida
LOC_Os02g29480.1 No alias mRNA endoribonuclease (G3BP) 0.08 Archaeplastida
LOC_Os03g30550.1 No alias mRNA endoribonuclease (G3BP) 0.04 Archaeplastida
LOC_Os04g30430.1 No alias mRNA endoribonuclease (G3BP) 0.07 Archaeplastida
LOC_Os04g43150.2 No alias mRNA endoribonuclease (G3BP) 0.04 Archaeplastida
Pp3c26_10520V3.1 No alias Nuclear transport factor 2 (NTF2) family protein with... 0.03 Archaeplastida
Solyc02g066830.4.1 No alias mRNA endoribonuclease (G3BP) 0.02 Archaeplastida
Solyc06g083730.3.1 No alias mRNA endoribonuclease (G3BP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000502 proteasome complex IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
BP GO:0009894 regulation of catabolic process IEP Neighborhood
CC GO:0017119 Golgi transport complex IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0032977 membrane insertase activity IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
BP GO:0042176 regulation of protein catabolic process IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044429 mitochondrial part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
CC GO:1905368 peptidase complex IEP Neighborhood
CC GO:1905369 endopeptidase complex IEP Neighborhood
CC GO:1990904 ribonucleoprotein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 315 373
IPR002075 NTF2 20 137
No external refs found!